prot_H-elongata_contig151709.3422.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151709.3422.1
Unique Nameprot_H-elongata_contig151709.3422.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: A0A6H5JX23_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX23_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.100e-33
Identity = 77/121 (63.64%), Postives = 88/121 (72.73%), Query Frame = 0
Query:    1 VHVRLGGS--YSGLDQDDDSIDSMDCTGSYAVWAVTADRDAC----GVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKAL 115
            VHVRLGG     G   D+ S+ S     SYAVWAVTA RDA     GV RV CSEMAQTEVP SA+QRVQCEEEALAALVKARC LD+ +PAL +L  + + PES++ WTL QVRTLE+AL
Sbjct:  570 VHVRLGGKGDKGGTPGDESSVAS-----SYAVWAVTAGRDAGSNARGVARVGCSEMAQTEVPISAIQRVQCEEEALAALVKARCTLDDFDPALKILVGDEASPESIQPWTLQQVRTLEQAL 685          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: D7G9E3_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E3_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 9.600e-33
Identity = 75/121 (61.98%), Postives = 87/121 (71.90%), Query Frame = 0
Query:    1 VHVRLGGS--YSGLDQDDDSIDSMDCTGSYAVWAVTADRDAC----GVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKAL 115
            +HVRLGG     G   D  S+ S     SYAVWAVTA R+A     GV RV CSEMAQTEVP SA+QRVQCEEEALAALVKARC LD+ +PAL +L  + + PES++ WTL QVRTLE+AL
Sbjct:  368 IHVRLGGEGDKGGTPGDKSSVAS-----SYAVWAVTAGRNAGSNARGVARVGCSEMAQTEVPMSAIQRVQCEEEALAALVKARCTLDDFDPALKILVGDEASPESIQPWTLQQVRTLEQAL 483          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: D8LCW0_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW0_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.880e-30
Identity = 75/119 (63.03%), Postives = 84/119 (70.59%), Query Frame = 0
Query:    1 VHVRLGGSYSGLDQDDDSIDSMDCTGSYAVWAVTADRDACGVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKALDDEF 119
            VHVRLG S S    D     S+    SYAVWA+TA R + GV RVACSEMAQT VP SAVQRVQ EEEALAALVKARC LD+  PAL +L   S+  ESV  WTL+QVRTLE+ L+ EF
Sbjct:  419 VHVRLGDSGSAAKGDKGVTTSV--ASSYAVWAITAGRHSPGVTRVACSEMAQTNVPMSAVQRVQSEEEALAALVKARCTLDDFRPALKVLDQAST--ESVAPWTLSQVRTLEQVLEKEF 533          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: A0A6H5K0T4_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T4_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 7.840e-29
Identity = 70/121 (57.85%), Postives = 83/121 (68.60%), Query Frame = 0
Query:    1 VHVRLGGSYSGLDQDDDSIDSMDCTGSYAVWAVTAD-RDACGVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKALDDEFD 120
            +HVRLGG     D             SYAVWA+T     A G VRVACSE+AQTE+P SA+QR  CEEEAL ALVK  CVLDN EPAL +LA++++ PESV+ W+L QVRTLE ALD +FD
Sbjct:  562 IHVRLGGKNE--DGXXXXXXXXXXXXSYAVWALTTGVSSASGDVRVACSEIAQTEIPASAIQR--CEEEALEALVKTNCVLDNFEPALKMLADSTTSPESVQPWSLDQVRTLEAALDKDFD 678          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: A0A6H5KVI2_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI2_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.290e-27
Identity = 70/119 (58.82%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 VHVRLGGSYSGLDQDDDSIDSMDCTGSYAVWAVTADRDACGVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKALDDEF 119
            VHVRLG   S    D     S+    SYAVWA+ A R + G VRVACSEMAQT VP SAVQRVQ EEEALAALVKARC LD+  PAL +L  + +  +SV  W L+QVRTLE+ L+ EF
Sbjct:  574 VHVRLGDRGSAAKGDKGVTTSV--ANSYAVWAIMAGRHSAGAVRVACSEMAQTTVPISAVQRVQSEEEALAALVKARCTLDDFRPALKVL--DQASLDSVAPWALSQVRTLEQVLEKEF 688          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: A0A6H5JLS8_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS8_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.850e-25
Identity = 62/120 (51.67%), Postives = 86/120 (71.67%), Query Frame = 0
Query:    1 VHVRLGGSYSGLDQDDDSIDSMDCTGSYAVWAVTADRDACGVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKALDDEFD 120
            VHVRLG + S  + + ++  +    GSYAVWA+T    + GV+RVACSE+AQT+VP  A+QRVQ EE+AL ALVKARC LD+ +PAL +   + +  ESV+ W L+QVR L++AL++ FD
Sbjct:  576 VHVRLGDAGSKNNGNVEAA-TTSVAGSYAVWAITVGCHSAGVIRVACSEIAQTKVPIPAIQRVQSEEQALGALVKARCTLDDFKPALKVF--DQASMESVDPWKLSQVRNLKQALEEHFD 692          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: D8LCW2_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW2_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.840e-23
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 VHVRLGGSYSGLDQDDDSIDSMDCTGSYAVWAVTADRDACGVVRVACSEMAQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVR 109
            VHVRLG   S    D ++  +     SYAVWA+T  R + GV+RVACSEMAQT+VP  A+QRVQ EE+ALAALVKARC LD+ +PAL++   + +  ESV+ W L+QVR
Sbjct:  499 VHVRLGDGGSEKTGDVEA-GTTSVASSYAVWAITVGRHSAGVIRVACSEMAQTKVPIPAIQRVQSEEQALAALVKARCTLDDFKPALNVF--DQASMESVDPWKLSQVR 604          
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Match: D7G9E4_ECTSI (BAH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E4_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 4.720e-13
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0
Query:   65 CEEEALAALVKARCVLDNAEPALSLLANNSSGPESVEQWTLTQVRTLEKALDDEFD 120
            CEE AL ALVK  CVLDN EPAL +LA++++ PES++ W+L QVRTLE ALD +FD
Sbjct:  517 CEEAALEALVKTNCVLDNFEPALKMLADSTTSPESLQPWSLDQVRTLEAALDKDFD 572          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151709.3422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JX23_9PHAE1.100e-3363.64BAH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G9E3_ECTSI9.600e-3361.98ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LCW0_ECTSI1.880e-3063.03ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K0T4_9PHAE7.840e-2957.85BAH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KVI2_9PHAE1.290e-2758.82ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JLS8_9PHAE1.850e-2551.67ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LCW2_ECTSI1.840e-2355.05ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G9E4_ECTSI4.720e-1364.29BAH domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151709contigH-elongata_contig151709:514..1451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151709.3422.1mRNA_H-elongata_contig151709.3422.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151709 514..1452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151709.3422.1 ID=prot_H-elongata_contig151709.3422.1|Name=mRNA_H-elongata_contig151709.3422.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
VHVRLGGSYSGLDQDDDSIDSMDCTGSYAVWAVTADRDACGVVRVACSEM
AQTEVPRSAVQRVQCEEEALAALVKARCVLDNAEPALSLLANNSSGPESV
EQWTLTQVRTLEKALDDEFD
back to top