prot_H-elongata_contig151409.3405.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151409.3405.1
Unique Nameprot_H-elongata_contig151409.3405.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig151409.3405.1 vs. uniprot
Match: A0A6H5KC50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC50_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.750e-26
Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 0 
Query:    1 QGRFEFAGLLRVEGRFEGVLKPAAGASVSVTRTGVIVGDIDGCHSVTVDGTVVGNVTASLADLRRHAHVEG 71
            +GR +F GLLRVEGRFEGVLKP  GA++ V R+GVI GD++GCHSV V+GTV+GNV+AS+  LRR+A+V+G
Sbjct:   10 KGRLQFKGLLRVEGRFEGVLKPVEGANMMVARSGVIAGDVEGCHSVIVEGTVIGNVSASVVVLRRYANVQG 80
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BLAST of mRNA_H-elongata_contig151409.3405.1 vs. uniprot
Match: D7G3H0_ECTSI (Globin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H0_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 4.800e-23
Identity = 48/73 (65.75%), Postives = 62/73 (84.93%), Query Frame = 0 
Query:    1 QGRFEFAGLLRVEGRFEGVLKPAAGASVSVTRTGVIVGDIDGCHSVTVDGTVVGNVTASLADLRRHAHVEGCV 73
            QGR +F GLLRVEGRFEGVLK A GA++ V R+GVI GD++GCHSV V+GT++GNV+AS+  LRR+A+V+G V
Sbjct:   46 QGRLQFKGLLRVEGRFEGVLKAAEGANMMVARSGVIAGDVEGCHSVIVEGTIIGNVSASVVVLRRYANVQGNV 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151409.3405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC50_9PHAE2.750e-2666.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3H0_ECTSI4.800e-2365.75Globin, putative n=1 Tax=Ectocarpus siliculosus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 1..72
e-value: 2.5E-12
score: 46.9
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 1..72
NoneNo IPR availablePANTHERPTHR35024:SF4coord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151409contigH-elongata_contig151409:597..815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151409.3405.1mRNA_H-elongata_contig151409.3405.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151409 597..815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151409.3405.1 ID=prot_H-elongata_contig151409.3405.1|Name=mRNA_H-elongata_contig151409.3405.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
QGRFEFAGLLRVEGRFEGVLKPAAGASVSVTRTGVIVGDIDGCHSVTVDG
TVVGNVTASLADLRRHAHVEGCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B