prot_H-elongata_contig149927.3340.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149927.3340.1
Unique Nameprot_H-elongata_contig149927.3340.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length272
Homology
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 224 bits (571), Expect = 4.530e-63
Identity = 127/290 (43.79%), Postives = 169/290 (58.28%), Query Frame = 0
Query:    2 YAQRPHTRRGPSTPESRRLRAAKLALERGGITKAASALVSLDAAPRNGITLDILQGKHPREDPAAIAEA-------------------KIEQPFEPSAIGDAIRKFDPQSAPGPSGLRHCHLQDVRDDELEVDIARLSRTIFKSETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            YA++P          S+  RA  LA +RGG++KAAS L++  + PRN  TL+ L+ KHP E    IAEA                    +E+PF    +   IR+ +PQ +PGPSGLR   LQ     EL   IA+L   IF    LP  FW LHT ANLS +G K RP+A GD+FRRI+G   C  Y   L  +FEP+G++GVA PGG +L+     L   +G  +L++D +N+FNS+ R   LPALA ++P +  YA N+YAR+PPKLL+  D+G  AVI SA GVQQ
Sbjct: 1065 YAKQPTRSPRQGEEASKHARAEHLAHQRGGLSKAASTLLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSRIEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGM-AVIPSATGVQQ 1353          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 6.810e-61
Identity = 127/295 (43.05%), Postives = 165/295 (55.93%), Query Frame = 0
Query:    1 MYAQRPHTRRGPSTPESRRLRAAKLALERGGITKAASALVSLDAAPRNGITLDILQGKHPREDPAAIAEA---------------KIE------QPFEPSAIGDAIRKFDPQSAPGPSGLRHCHLQ-DVRDDELEVDIARLSRTIFK-SETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            MY +    +    T ++R+ RA +LA E GGITKAASAL+S   +PRN  TL+ L+  HP EDP  IA A               KI+      +PFE   I   ++K +PQSAPGP GLR  +LQ     D     +A  S  +F   + LP  FW LHT ANLS LG K RP+A G V RRII  +FC  Y   +   FE   + G   PGGV+++    +L   +G  ILSFDGKN++NS+ R   LPA+AT  P +  Y  N+YAR   KLLF M++G+  V+ S RGVQQ
Sbjct:   24 MYEKNRRLQYYADTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDSVAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 4.470e-59
Identity = 125/295 (42.37%), Postives = 164/295 (55.59%), Query Frame = 0
Query:    1 MYAQRPHTRRGPSTPESRRLRAAKLALERGGITKAASALVSLDAAPRNGITLDILQGKHPREDPAAIAEA---------------------KIEQPFEPSAIGDAIRKFDPQSAPGPSGLRHCHLQ-DVRDDELEVDIARLSRTIFK-SETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            MY +    +    T ++R+ RA +LA E GGITKAASAL+S   +PRN  TL+ L+  HP EDP  IA A                     + ++PFE   I   ++K +PQSAPGP GLR  +LQ     D     +A  S  +F   + LP  FW LHT ANLS LG K RP+A G V RRII  +FC  Y   +   FE   + G   PGGV+++    +L   +G  ILSFDGKN++NS+ R   LPA+AT  P +  Y  N+YAR   KLLF M++G+  V+ S RGVQQ
Sbjct:   24 MYEKNRRLQYYADTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.050e-58
Identity = 126/295 (42.71%), Postives = 164/295 (55.59%), Query Frame = 0
Query:    1 MYAQRPHTRRGPSTPESRRLRAAKLALERGGITKAASALVSLDAAPRNGITLDILQGKHPREDPAAIAEA---------------------KIEQPFEPSAIGDAIRKFDPQSAPGPSGLRHCHLQ-DVRDDELEVDIARLSRTIFK-SETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            MY +    R    T ++R+ RA +LA E GGITKAASAL+S   +PRN  TL+ L+  HP EDP  IA A                     + ++PFE   I   ++K +PQSAPGP GLR  +LQ     D     +A  S  +F   + LP  FW LHT ANLS LG K RP+A G V RRII  +FC  Y   +   FE   + G   PGGV+++    +L   +G  ILSFDGKN++NS+ R   LPA+AT  P +  Y  N+YAR   KLLF M++G+  V+ S RGVQQ
Sbjct:   24 MYEKNRRLRYYADTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 8.280e-58
Identity = 125/295 (42.37%), Postives = 164/295 (55.59%), Query Frame = 0
Query:    1 MYAQRPHTRRGPSTPESRRLRAAKLALERGGITKAASALVSLDAAPRNGITLDILQGKHPREDPAAIAEA---------------------KIEQPFEPSAIGDAIRKFDPQSAPGPSGLRHCHLQ-DVRDDELEVDIARLSRTIFK-SETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            MY +    +    T ++R+ RA +LA E GGITKAASAL+S   +PRN  TL+ L+  HP EDP  IA A                     + ++PFE   I   ++K +PQSAPGP GLR  +LQ     D     +A  S  +F   + LP  FW LHT ANLS LG K RP+A G V RRII  +FC  Y   +   FE   + G   PGGV+++    +L   +G  ILSFDGKN++NS+ R   LPA+AT  P +  Y  N+YAR   KLLF M++G+  V+ S RGVQQ
Sbjct:   24 MYEKNRRLQYYADTEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.140e-35
Identity = 70/152 (46.05%), Postives = 93/152 (61.18%), Query Frame = 0
Query:  121 RTIFKSETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            +  +  + LP  FW LHT ANLS LG K RP+A G V RRII  +FC  Y   +   FE   + G   PGGV+++    +L   +G  ILSFDGKN++NS+ R   LPA+AT  P ++ Y  N+YAR   KLLF M++G+  V+ S RGVQQ
Sbjct:   15 KVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 166          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.110e-34
Identity = 70/164 (42.68%), Postives = 95/164 (57.93%), Query Frame = 0
Query:  110 DELEVDIARLSRTIFK-SETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            D+    +A  S  +F   + LP LFW   T A+LS LG K RP+A G V RRII  +FC  Y + +   FE   + G   PGGV+++    +L   +G  ILSFDG+N++NSI R   L A+AT  P +  Y  NLYAR   KLLF M++G+  ++ S R VQQ
Sbjct:    3 DDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.250e-32
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 0
Query:  121 RTIFKSETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            +  +  + LP   W LHT ANLS LG K RP+A G V RRII  +F   Y   +   FE   + G   PGGV+++    +L   +G  ILSFDGKN++NS+ R   LPA+AT+ P +  Y  N+YAR   KLLF M++G+  V+ S RGVQQ
Sbjct:   15 KVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 166          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.120e-20
Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = 0
Query:  110 DELEVDIARLSRTIFK-SETLPPLFWTLHTGANLSTLGAKARPVACGDVFRRII------------GETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVSLGFAEGCIILSFDGKNSFNSIYRHEFLPALA 231
            D+    +A  S  +F   + LP LFW LHT A+LS LG K RP+A G V RRII              +FC  Y + +   FE   + G   PGGV+++    +    +G  ILSFDGKN++NSI R   L A+A
Sbjct:    3 DDFSATLADFSHKVFYYGDELPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAAPSHQQGSTILSFDGKNAYNSILRSSILTAVA 137          
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Match: A0A812N9S6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812N9S6_9DINO)

HSP 1 Score: 98.2 bits (243), Expect = 1.390e-19
Identity = 89/286 (31.12%), Postives = 126/286 (44.06%), Query Frame = 0
Query:    6 PHTRRGPSTP--ESRRLRAAKLALERGGITKAASALVSLDAAPRNGITLDILQGKHPREDPAAIAEAKIEQP-----FEPSAIGDAIRKFDPQSAPGPSGLRHCHLQD----VRDDELEVDIARLSRTIFKSETLPPLFWTLHTGANLSTLGAK---ARPVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAV-----SLGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPPKLLFAMDNGTTAVIDSARGVQQ 272
            P  R GP+    E+R  R  +LA E G + +A  AL+     PR+  TL  LQ KHP+     +A     +P     F   A+  A+R F   SAPGPSGLR  HL++       DE+ V +A L   + + E  P        GA L  L       RP+A G+V RR++G+  C    +       P  + GV  P G +    A      S    E  +++  D +N+FN++ R   L      VP VS +A   Y +   +L F        V+ S  GVQQ
Sbjct:  102 PRQRSGPTRQSLEARHSRCRRLAAE-GDLARACDALLQEPPLPRDAATLAALQAKHPQSPLPDLAALGAPRPGAVPEFSAEAVAKAVRSFKRASAPGPSGLRPDHLRESLSTAHADEVAVHLAALCHLLARGEA-PATLAPHLAGATLHALPKPQGGVRPIAIGEVLRRLVGKLLCGSVREAARDQLWPL-QVGVGVPSGSEAAVHAARHWLQSHSGHENRVLVKLDFRNAFNAVSRASVLREARARVPEVSSWADWCYGQSS-RLRFGKH-----VVASTSGVQQ 378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149927.3340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN4.530e-6343.79Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE6.810e-6143.05Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE4.470e-5942.37Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE3.050e-5842.71Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE8.280e-5842.37Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KSY9_9PHAE1.140e-3546.05Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L3H3_9PHAE2.110e-3442.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1H0_9PHAE1.250e-3244.74Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQE6_9PHAE1.120e-2039.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A812N9S6_9DINO1.390e-1931.12Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149927contigH-elongata_contig149927:22..897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149927.3340.1mRNA_H-elongata_contig149927.3340.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149927 22..897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149927.3340.1 ID=prot_H-elongata_contig149927.3340.1|Name=mRNA_H-elongata_contig149927.3340.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=272bp
MYAQRPHTRRGPSTPESRRLRAAKLALERGGITKAASALVSLDAAPRNGI
TLDILQGKHPREDPAAIAEAKIEQPFEPSAIGDAIRKFDPQSAPGPSGLR
HCHLQDVRDDELEVDIARLSRTIFKSETLPPLFWTLHTGANLSTLGAKAR
PVACGDVFRRIIGETFCSDYSKQLVGNFEPKGEHGVACPGGVDLMTRAVS
LGFAEGCIILSFDGKNSFNSIYRHEFLPALATVVPVVSGYAANLYARDPP
KLLFAMDNGTTAVIDSARGVQQ
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