prot_H-elongata_contig14721.3201.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14721.3201.1
Unique Nameprot_H-elongata_contig14721.3201.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
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BLAST of mRNA_H-elongata_contig14721.3201.1 vs. uniprot
Match: A0A2I3GMY6_NOMLE (Kinesin light chain n=1 Tax=Nomascus leucogenys TaxID=61853 RepID=A0A2I3GMY6_NOMLE)

HSP 1 Score: 54.3 bits (129), Expect = 1.740e-6
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    1 MAIDLTNLAALLKSQGDYDASEEHYKRALIIFEKELDPHHPRMARLLRDLAELLYAKGQNAEVDELYQRIL 71
            +A  L NLA L ++QG Y+A E +Y+RAL I+E +L P +P +AR   +L       G+ AE + LY+ IL
Sbjct:  233 VAKQLNNLALLCQNQGKYEAVERYYQRALAIYEGQLGPDNPNVARTKNNL-------GKYAEAETLYKEIL 296
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BLAST of mRNA_H-elongata_contig14721.3201.1 vs. uniprot
Match: A0A7S3NMM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMM1_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.130e-5
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0 
Query:    4 DLTNLAALLKSQGDYDASEEHYKRALIIFEKELDPHHPRMARLLRDL 50
            DL NLA LL+ QG YD ++ H + AL  FE++  P HP++A+ L DL
Sbjct:    1 DLLNLAGLLREQGYYDKAKPHNECALKHFEEKFGPDHPKVAKALNDL 47
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BLAST of mRNA_H-elongata_contig14721.3201.1 vs. uniprot
Match: A0A7Y5NSD3_9DELT (Tetratricopeptide repeat protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NSD3_9DELT)

HSP 1 Score: 50.1 bits (118), Expect = 5.120e-5
Identity = 30/81 (37.04%), Postives = 44/81 (54.32%), Query Frame = 0 
Query:    5 LTNLAALLKSQGDYDASEEHYKRALIIFEKELDPHHPRMARLLRDLAELLYAKGQNAEVDELYQRILGIDKKPDGSIHPTV 85
            L NLAAL + QGD DA++  ++RAL   E  L   H  +   L  LA++ +  G+     +LY+R L + +K  G  HP V
Sbjct:  232 LHNLAALKEEQGDTDAAQGIFERALSAKEARLGRDHIALRATLVRLAQIHHRDGRLIHALDLYERALVLARKEHGDEHPIV 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14721.3201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2I3GMY6_NOMLE1.740e-642.25Kinesin light chain n=1 Tax=Nomascus leucogenys Ta... [more]
A0A7S3NMM1_9STRA3.130e-548.94Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7Y5NSD3_9DELT5.120e-537.04Tetratricopeptide repeat protein n=1 Tax=Polyangia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 2..35
e-value: 0.0026
score: 27.0
coord: 44..77
e-value: 47.0
score: 9.1
NoneNo IPR availablePFAMPF13424TPR_12coord: 5..75
e-value: 2.7E-15
score: 56.4
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 3..82
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..89
e-value: 9.3E-20
score: 72.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..75
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 2..77
score: 9.126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14721contigH-elongata_contig14721:1488..3360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14721.3201.1mRNA_H-elongata_contig14721.3201.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14721 484..3839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14721.3201.1 ID=prot_H-elongata_contig14721.3201.1|Name=mRNA_H-elongata_contig14721.3201.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
MAIDLTNLAALLKSQGDYDASEEHYKRALIIFEKELDPHHPRMARLLRDL
AELLYAKGQNAEVDELYQRILGIDKKPDGSIHPTVCMDLFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom