prot_H-elongata_contig14660.3166.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig14660.3166.1
Unique Name	prot_H-elongata_contig14660.3166.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	105

Homology

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BLAST of mRNA_H-elongata_contig14660.3166.1 vs. uniprot
Match: D8LTK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 2.180e-22
Identity = 44/76 (57.89%), Postives = 62/76 (81.58%), Query Frame = 0

Query:   14 AKEHGEGFVNTLGDVLARHGWTIVFVLVVYYNVKDRIRRRWRIWQNERSIADANRSSRRAVLDRERAKVVADKQAE 89
            AKE  +  V+ + D+LARHGWT VF+++V+YN KD ++R +R W+N+RS+ DANR+ RRAVLDRERA+ VA+KQA+
Sbjct:   39 AKEASDRLVSFVADILARHGWTAVFLVIVWYNCKDAVKRHYRKWRNKRSLDDANRADRRAVLDRERARSVAEKQAQ 114

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BLAST of mRNA_H-elongata_contig14660.3166.1 vs. uniprot
Match: A0A6H5KQI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQI4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.010e-20
Identity = 42/75 (56.00%), Postives = 60/75 (80.00%), Query Frame = 0

Query:   15 KEHGEGFVNTLGDVLARHGWTIVFVLVVYYNVKDRIRRRWRIWQNERSIADANRSSRRAVLDRERAKVVADKQAE 89
            KE  +  V+ + DVLAR+GWT +F+++V+YN KD ++RR+  W+N+RS+ DANR  RRAVLDRERA+ VA+KQA+
Sbjct:   40 KEASDRLVSFVADVLARYGWTAIFLVIVWYNCKDAVKRRYWKWRNKRSLDDANRPDRRAVLDRERARSVAEKQAQ 114

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig14660.3166.1 vs. uniprot

BLAST of mRNA_H-elongata_contig14660.3166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTK6_ECTSI	2.180e-22	57.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KQI4_9PHAE	4.010e-20	56.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..46
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 47..104
None	No IPR available	TMHMM	TMhelix		coord: 28..46

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig14660	contig	H-elongata_contig14660:1539..2844 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig14660.3166.1	mRNA_H-elongata_contig14660.3166.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig14660 941..2935 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig14660.3166.1 ID=prot_H-elongata_contig14660.3166.1|Name=mRNA_H-elongata_contig14660.3166.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MAWGEDFMAKLTGAKEHGEGFVNTLGDVLARHGWTIVFVLVVYYNVKDRI
RRRWRIWQNERSIADANRSSRRAVLDRERAKVVADKQAEVQAALGTKANN
KKKS*