prot_H-elongata_contig146303.3155.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig146303.3155.1
Unique Nameprot_H-elongata_contig146303.3155.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig146303.3155.1 vs. uniprot
Match: D8LPM8_ECTSI (Similar to C18orf24 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM8_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.800e-52
Identity = 96/124 (77.42%), Postives = 104/124 (83.87%), Query Frame = 0
Query:    1 PTVPVLELVTVVELEEVPRSTRARLTIAQVNAAVVDIQKATEQRHAFLSKPRNKMSQKQMARLAELQKQQVPAHGGEPFIAESDLRVLPAFKKGEVTAKALIATLRSLKRLKVVRAAGMMTYVV 124
            P V  +ELVTV EL+ VPRSTR RLTI QVNAAV DIQKA E+RHAFLSKPR KMS+KQ  RL EL  Q+VPAHGG PFIAE DLR LP+FKKGE+TAKALIATLR+LKRLK VR AGMMTYVV
Sbjct:    2 PEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 125          
BLAST of mRNA_H-elongata_contig146303.3155.1 vs. uniprot
Match: A0A6H5KVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT8_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 3.280e-49
Identity = 96/124 (77.42%), Postives = 103/124 (83.06%), Query Frame = 0
Query:    1 PTVPVLELVTVVELEEVPRSTRARLTIAQVNAAVVDIQKATEQRHAFLSKPRNKMSQKQMARLAELQKQQVPAHGGEPFIAESDLRVLPAFKKGEVTAKALIATLRSLKRLKVVRAAGMMTYVV 124
            P V  +ELVTV EL  VPRSTR RLTI QVNAAV DIQKA E+RHAFLSKPR KMS+KQ  RL EL  Q+VPAHGG PFIAE DLR LP+FKKGE+TAKALIATLR+LKRLK VR AGMMTYVV
Sbjct:  240 PKVVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 363          
BLAST of mRNA_H-elongata_contig146303.3155.1 vs. uniprot
Match: A0A835YPY4_9STRA (C18orf24 protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY4_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 9.720e-21
Identity = 48/124 (38.71%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    4 PVLELVTVVELEEVPRSTRARLTIAQVNAAVVDIQKATEQRHAFLSKPRNKMSQKQMARLAELQKQQVPAHGGEPFIAESDLRVLPAFK-KGEVTAKALIATLRSLKRLKVVRAAGMMTYVVIG 126
            P ++LVT  EL+ +P++TR RL +  VNAA+ ++Q     ++  L++P++K+++K   R  +    + P H G  F+ ES++R   A   KGE TA+ ++ +LRSLKR + +RA G+MTYVV+ 
Sbjct:    2 PCIQLVTSAELQALPKTTRGRLQLDHVNAAITELQAVLTTKYTLLARPKSKLNEKLRRRYEQYAAAEAPEHEGAHFLTESEMRSCAALGGKGEATARLMLNSLRSLKRFRPLRANGVMTYVVVA 125          
BLAST of mRNA_H-elongata_contig146303.3155.1 vs. uniprot
Match: UPI001E1D1615 (spindle and kinetochore-associated protein 1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D1615)

HSP 1 Score: 75.9 bits (185), Expect = 5.140e-14
Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    6 LELVTVVELEEVPRSTRARLTIAQVNAAVVDIQKATEQRHAFLSKPRNKMSQKQMARLAELQKQQVPAHGGEPFIAESDLRVLPAFKKGEVTAKALIATLRSLKRLKVVRAAG-MMTYVVI 125
            +E +T+VE E +P+  R RL  AQVNAAVV+I K  + ++  LS+PR K+S+  M  + E Q+Q+     G  F+ +SD++   + K  +   K+L+  LR LKRL+ VR  G ++ Y V+
Sbjct:  144 VEFITMVEFESIPKYIRGRLQYAQVNAAVVEINKTLQTKYNLLSRPRAKLSELNMKIVGECQRQENKETKGLHFVVDSDIKRWSSLKM-DTAGKSLLTMLRMLKRLREVRGPGNLVRYAVL 263          
BLAST of mRNA_H-elongata_contig146303.3155.1 vs. uniprot
Match: A0A0N7ZAT1_SCYOL (Uncharacterized protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0N7ZAT1_SCYOL)

HSP 1 Score: 75.1 bits (183), Expect = 1.050e-13
Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    6 LELVTVVELEEVPRSTRARLTIAQVNAAVVDIQKATEQRHAFLSKPRNKMSQKQMARLAELQKQQVPAHGGEPFIAESDLRVLPAFKKGEVTAKALIATLRSLKRLKVVRAAG-MMTYVVI 125
            +E +T+ E E VP+  R RL  AQVNAAVV+I K  E +++ LS+PR K+S+  M  + E Q+Q+     G  F+ + D++   + K  +   K+L+  LR LKRL+ VR  G ++ Y V+
Sbjct:  148 VEFITMKEFESVPKYIRGRLQYAQVNAAVVEINKTLETKYSLLSRPRAKLSELNMKIVGECQRQENKETKGLHFVVDGDIKRWSSLKM-DTAGKSLLTVLRMLKRLREVRGPGNLVRYAVL 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146303.3155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPM8_ECTSI1.800e-5277.42Similar to C18orf24 protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5KVT8_9PHAE3.280e-4977.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPY4_9STRA9.720e-2138.71C18orf24 protein-like protein n=1 Tax=Tribonema mi... [more]
UPI001E1D16155.140e-1438.84spindle and kinetochore-associated protein 1-like ... [more]
A0A0N7ZAT1_SCYOL1.050e-1338.84Uncharacterized protein n=2 Tax=Scylla olivacea Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009829Spindle and kinetochore-associated protein 1PFAMPF07160SKA1coord: 6..116
e-value: 2.6E-18
score: 66.8
IPR009829Spindle and kinetochore-associated protein 1PANTHERPTHR28573FAMILY NOT NAMEDcoord: 4..125
IPR042031SKA1 microtubule binding domainGENE3D1.10.10.1890coord: 3..125
e-value: 3.5E-26
score: 93.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig146303contigH-elongata_contig146303:555..1605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig146303.3155.1mRNA_H-elongata_contig146303.3155.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig146303 555..1605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig146303.3155.1 ID=prot_H-elongata_contig146303.3155.1|Name=mRNA_H-elongata_contig146303.3155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
PTVPVLELVTVVELEEVPRSTRARLTIAQVNAAVVDIQKATEQRHAFLSK
PRNKMSQKQMARLAELQKQQVPAHGGEPFIAESDLRVLPAFKKGEVTAKA
LIATLRSLKRLKVVRAAGMMTYVVIGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009829SKA1
IPR042031SKA1-MBD