prot_H-elongata_contig14601.3141.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14601.3141.1
Unique Nameprot_H-elongata_contig14601.3141.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length201
Homology
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BLAST of mRNA_H-elongata_contig14601.3141.1 vs. uniprot
Match: D7FTB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB6_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 4.300e-38
Identity = 71/134 (52.99%), Postives = 92/134 (68.66%), Query Frame = 0 
Query:    2 LGWKFDVPQMPTALGMSSIPPATTMFFELHHHSNEVHAIQENPVTAKGREDGNVTHEQEDYYYVRTYTWTPMFGQKEVVLSACSHVEPGKGCPLSTLKSTILNDTINTGSWRDICHHVPFVEAEDMAKKITYRD 135
            LGW FDV   PTALG SSIPPATTM FELH+ ++E          A+  +D     E+  YYYVRT+TWTP FGQ+EVVL ACS VE G GC L+T+++ + +   +TGSW++IC+ VPF +AE MA+ IT+ D
Sbjct:  262 LGWHFDVKGAPTALGTSSIPPATTMVFELHYRAHE--QADNGTTGAEQVQDEASAQEEAGYYYVRTFTWTPEFGQREVVLDACSGVEAGTGCRLTTIEAIVSDSVQDTGSWQEICNDVPFDQAEQMAQHITFSD 393
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BLAST of mRNA_H-elongata_contig14601.3141.1 vs. uniprot
Match: A0A2D4BT22_PYTIN (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT22_PYTIN)

HSP 1 Score: 83.6 bits (205), Expect = 3.720e-15
Identity = 46/120 (38.33%), Postives = 62/120 (51.67%), Query Frame = 0 
Query:    1 MLGWKFDVPQMPTALGMSSIPPATTMFFELHHHSNEVHAIQENPVTAKGREDGNVTHEQEDYYYVRTYTWTPMFGQKEVVLSACSHVEPGKGCPLSTLKSTILNDTINTGSWRDICHHVP 120
            MLGW       P+ALGM+S+ P TTMFFELH   N                    T E E +Y+VRT+ W+P   ++ V LS CS ++    CPL    + I N    TG+W+DIC++ P
Sbjct: 1055 MLGWNLSFAGEPSALGMTSLHPGTTMFFELHAEKN-------------------ATTESE-HYFVRTFVWSPQTAREAVKLSKCSTLD----CPLDEFNAIIKNHIARTGTWQDICNYHP 1150
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BLAST of mRNA_H-elongata_contig14601.3141.1 vs. uniprot
Match: T0QHB5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QHB5_SAPDV)

HSP 1 Score: 59.3 bits (142), Expect = 6.250e-7
Identity = 36/129 (27.91%), Postives = 60/129 (46.51%), Query Frame = 0 
Query:    1 MLGWKFDVPQMPTALGMSS--IPPATTMFFELHHHSNEVHAIQENPVTAKGREDGNVTHEQEDYYYVRTYTWTPMFGQKEVVLSACSHVEPGKGCPLSTLKSTILNDTINTGSWRDICHHVPFVEAEDM 127
            +L W+F++P    A G ++  +PPATTM+FELH  +              GR+             VRT+ W+P+ G+  V L  CS ++    CP+   +  +      T SW  +C + P  + ++M
Sbjct:  278 LLDWRFEMPGEARAPGFNTTALPPATTMYFELHEEN--------------GRQ------------LVRTFLWSPLTGRAPVQLGKCSALD----CPMDEFRGILDAHVAATSSWETLCAYHPVKKVKNM 376
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14601.3141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTB6_ECTSI4.300e-3852.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4BT22_PYTIN3.720e-1538.33Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
T0QHB5_SAPDV6.250e-727.91Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..200
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
IPR029033Histidine phosphatase superfamilySUPERFAMILY53254Phosphoglycerate mutase-likecoord: 13..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14601contigH-elongata_contig14601:1664..3791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14601.3141.1mRNA_H-elongata_contig14601.3141.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14601 1240..3816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14601.3141.1 ID=prot_H-elongata_contig14601.3141.1|Name=mRNA_H-elongata_contig14601.3141.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
MLGWKFDVPQMPTALGMSSIPPATTMFFELHHHSNEVHAIQENPVTAKGR
EDGNVTHEQEDYYYVRTYTWTPMFGQKEVVLSACSHVEPGKGCPLSTLKS
TILNDTINTGSWRDICHHVPFVEAEDMAKKITYRDGEEAGVGQDREVRWS
QPGHLMTMSPLTAVAVVVLLVILVVLRVLMMKENFMPTHDREEEEYEILP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam