prot_H-elongata_contig144793.3076.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144793.3076.1
Unique Nameprot_H-elongata_contig144793.3076.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 5.460e-29
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M AI+T+T W +ERL  +GI L    S+ L   G     LT +++  +  IGL+V   GM VVG+P GTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:   34 MQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 158          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.370e-28
Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M AI+T+T W +ERL  +GI L    S+ L   G     LT +++  +  IGL+V   GM VVG+PVGTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:  368 MQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 492          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.460e-28
Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M AI+T+T W +ERL  +GI L    S+ L   G     LT +++  +  IGL+V   GM VVG+PVGTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:  368 MQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 492          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.480e-28
Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M AI+T+T W +ERL  +GI L    S+ L   G     LT +++  +  IGL+V   GM VVG+PVGTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:  216 MQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 340          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 5.240e-27
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M AI+T+T W +ERL  +GI L    S+ L   G     LT +++  +  IGL+V   GM VVG+PVGTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL  LLRT+ PSIT
Sbjct:   34 MQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSIT 158          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5L2W9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W9_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 7.400e-27
Identity = 58/125 (46.40%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M A +T+T W +ER   +GI L    S+ L   G     LT +++  +  IGL+V   GM VVG+PVGTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:    1 MQATSTVTNWIQERFSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 125          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 8.940e-26
Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    3 AIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            AIAT+T W ++ L  +GI L    S+ L   G     LT +++  +   GL+V   GM +VGVPVGTE F+R FV     G PAEL+R L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:   69 AIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 191          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5KDI2_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI2_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.500e-25
Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 0
Query:    1 MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            M AI+T+T W +E    +GI L    S+ L   G     LT +++  +  IGL+V   GM VV +PVGTE F+R+FV K   G PAEL+  L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:   34 MQAISTVTNWIQESRSQKGIELNLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVAIPVGTEEFQRNFVPKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 158          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.290e-24
Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    3 AIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            AIAT+T W ++ L  +GI L    S+ L   G     LT +++  +   GL+V   GM +VGVPVGTE F+R FV     G PAEL+R L  +++ Q  +Q+LRLS V RL HLLRT+ PSIT
Sbjct:  370 AIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSIT 492          
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 9.140e-24
Identity = 56/123 (45.53%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    3 AIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDNIGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQGRFQILRLSAVSRLSHLLRTVPPSIT 125
            AIAT+T W ++ L  + I L    S+ L   G     LT +++  +   GL+V   GM +VGVPVGTE F+R FV     G PAEL+R L  +++ Q  +Q+LRLS V RL HLLRT  PSIT
Sbjct:   36 AIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSIT 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144793.3076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JLD7_9PHAE5.460e-2947.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM0_9PHAE4.370e-2848.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE4.460e-2848.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE4.480e-2848.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKJ7_9PHAE5.240e-2747.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2W9_9PHAE7.400e-2746.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K541_9PHAE8.940e-2646.34Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDI2_9PHAE1.500e-2545.60Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KGJ4_9PHAE1.290e-2446.34Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JL76_9PHAE9.140e-2445.53Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144793contigH-elongata_contig144793:1186..1560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144793.3076.1mRNA_H-elongata_contig144793.3076.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144793 1171..1560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144793.3076.1 ID=prot_H-elongata_contig144793.3076.1|Name=mRNA_H-elongata_contig144793.3076.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MAAIATLTEWSKERLGVEGISLKRRNSQALLANGATRKELTEEQRIAVDN
IGLTVVGQGMRVVGVPVGTERFKRDFVDKAVNGKPAELVRALVPMNNTQG
RFQILRLSAVSRLSHLLRTVPPSIT
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