prot_H-elongata_contig144546.3055.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144546.3055.1
Unique Nameprot_H-elongata_contig144546.3055.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: D7FQ27_ECTSI (Chorismate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ27_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 3.690e-72
Identity = 114/162 (70.37%), Postives = 134/162 (82.72%), Query Frame = 0
Query:    1 RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDD-HVTLESELG----LQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPSLEGLHDL 157
            RY+SE+VP++C PGDD+QHGS+VVCDV  LQALSRRVHLGKFVAESKFQEDS  YQ+LCRAGD RGVL  L NK VE+KVL+RAF+KASTYG DI+D  V+ E   G     +  +NFKV+P  IV IY++ VIPLTKDVEI+YLFQRTGYPCPSLEG+HD+
Sbjct:  235 RYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKTYQDLCRAGDARGVLELLTNKAVEEKVLKRAFMKASTYGSDINDVPVSTEDAKGGDGAAKAEQNFKVNPQFIVDIYRDTVIPLTKDVEILYLFQRTGYPCPSLEGIHDI 396          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A836CAA2_9STRA (Chorismate mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA2_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.630e-57
Identity = 94/156 (60.26%), Postives = 113/156 (72.44%), Query Frame = 0
Query:    1 RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTLESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPSLEGLHD 156
            RY++EVVP +C  GDDEQHGS+V+CD+  LQALSRRVH GKFVAESKFQED   Y+ LC  G+ RGV   L NK VEKKV++RA  KA+ Y ++I    T E   G +    FKV P  I  IY++ +IPLTKDVEI+YLFQRTGY CPSL G+HD
Sbjct:   77 RYVAEVVPAICGAGDDEQHGSSVLCDINALQALSRRVHFGKFVAESKFQEDGDLYRNLCSEGNARGVNELLTNKAVEKKVIERALNKATAYAQEI----TWEGAAGSR----FKVRPEAISAIYKDIIIPLTKDVEILYLFQRTGYTCPSLAGIHD 224          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A6U1P8R8_9STRA (Chorismate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P8R8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.220e-49
Identity = 83/156 (53.21%), Postives = 107/156 (68.59%), Query Frame = 0
Query:    1 RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTLESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPSLEGLHD 156
            RY+ EVVP +C  GDDEQ+GS  + D+  LQALSRR+H G FVAESKF ++  +Y+ L RAGD +GV   L N  VE+ VLQRAF KASTYG+DI       +  G  E   +KV+P  I  +Y+  +IPLTK+VE++YLF+R G PCP L G+HD
Sbjct:  220 RYVDEVVPRICSAGDDEQYGSTALADITALQALSRRIHYGLFVAESKFLDNPSQYEALVRAGDAKGVYDLLTNASVEELVLQRAFRKASTYGQDI-------TATGDPETTEYKVEPRIIRGLYKSVIIPLTKEVEVLYLFERVGCPCPDLSGIHD 368          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A4D9CWZ2_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWZ2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.640e-46
Identity = 83/149 (55.70%), Postives = 105/149 (70.47%), Query Frame = 0
Query:    2 YISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTLESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPS 150
            YI+EVVP VC  GDDEQHGS+V+ D+ +LQALSRR+HLGKFVAE+KFQED  KY+ L  A DV GV++ L N  VE +VL RA +KASTYG+DI           + E    KV+P  I  IY++ +IPLTKDVE++YLF+R G   P+
Sbjct:  116 YINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEDEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQDI-----------MGETEACKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVGRKPPA 253          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: W7U1H9_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1H9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.000e-44
Identity = 82/149 (55.03%), Postives = 105/149 (70.47%), Query Frame = 0
Query:    2 YISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTLESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPS 150
            YI+EVVP VC  GDDEQHGS+V+ D+ +LQALSRR+HLGKFVAE+KFQE+  KY+ L  A DV GV++ L N  VE +VL RA +KASTYG+DI           + E    KV+P  I  IY++ +IPLTKDVE++YLF+R G   P+
Sbjct:  282 YINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEEEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQDI-----------MGETEACKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVGRKPPA 419          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A7S2VZ80_9STRA (Chorismate mutase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ80_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.870e-41
Identity = 83/179 (46.37%), Postives = 110/179 (61.45%), Query Frame = 0
Query:    1 RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTL------------------------ESELG--LQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPSLEG 153
            +Y S ++P +  PGDDEQHGSAVVCD+AVLQALSRRVH GKFVAESK++ D   YQ+L +  D  GV+  L N PVE+KVLQRA +KA+TYGR+   ++ +                        E+ +G    + +  KV+P  I  IY++F+IPLTKD+E+ YLF R G   P   G
Sbjct:  202 KYTSWILPKMSQPGDDEQHGSAVVCDIAVLQALSRRVHYGKFVAESKYRSDPKAYQQLVQDNDADGVMKLLTNAPVEEKVLQRAKLKAATYGREPLSNIAIPNLECNDTASIVAXXXXXXXXXXVEALVGGDFSQKKRGKVNPTVIEAIYRDFIIPLTKDIEVAYLFLRCGKQPPKEYG 380          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A0G4FZ06_9ALVE (Chorismate mutase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FZ06_9ALVE)

HSP 1 Score: 149 bits (375), Expect = 7.030e-39
Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 0
Query:    2 YISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTLESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPSLEGLH 155
            Y + ++PL+C  GDDE++GSA  CD+  LQALS+RVH GKFVAE+KFQED+  Y++L    D  G+L +L N+ VE+++L R   KASTYGRD+      +S L      +FKVDP  IV  Y++F+IP+TK+VE+ YL +R G    +  G H
Sbjct:  136 YTNVLLPLICRSGDDEEYGSAATCDITCLQALSKRVHYGKFVAEAKFQEDTETYKQLIAGKDADGILEKLTNRAVEERLLDRVRQKASTYGRDVGMTCATDSTL------HFKVDPEVIVAAYRDFIIPVTKEVEVDYLLERCGPLKVAFVGEH 283          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A7S3V864_9STRA (Chorismate mutase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V864_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.530e-38
Identity = 80/175 (45.71%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    1 RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRD-IDDHVTLESELGLQEHRNF------------------------KVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPS 150
            +Y+  VVP +   GDDEQHGS V+ D+A+LQALS+R H GKFVAESK++ D  +YQ L  AGD  GV+  L N  VE +VL+RA +KASTYGR+ +   + +E    + +  NF                        KVDP  +  IY++FVIPLTKDVE+ YLF+R G   PS
Sbjct:  191 KYLKWVVPSISASGDDEQHGSTVLADIALLQALSKRAHFGKFVAESKYRSDPEEYQRLVDAGDADGVMELLTNAVVEARVLRRARIKASTYGREPLMTQLPIEKADQISDSANFVAAAAASAVASAFQMIDQSDDFQGKVDPAIVQDIYEKFVIPLTKDVEVDYLFRRCGRDPPS 365          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A7S2SIA4_9STRA (Chorismate mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIA4_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.920e-37
Identity = 68/144 (47.22%), Postives = 100/144 (69.44%), Query Frame = 0
Query:    2 YISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVTLESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTG 145
            YI +VVP +C PGDD+Q+GS+ +CD+A LQALSRR+H+GKFVAESKFQ +   + +L  A D+ G+   L N+ VE++V  RA +KA T+G+D       ++++G      FKV PH + ++Y++ +IPLTK V++ YLF R G
Sbjct:  144 YIDKVVPSICDPGDDQQYGSSALCDIACLQALSRRIHIGKFVAESKFQHEPELFTKLVEARDIEGINRLLTNELVEERVCHRARLKAVTFGQDAFS----DTDVG------FKVAPHKLFELYRDMIIPLTKQVQVRYLFDRVG 277          
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Match: A0A1E7FY19_9STRA (Chorismate mutase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FY19_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.470e-37
Identity = 79/153 (51.63%), Postives = 99/153 (64.71%), Query Frame = 0
Query:    1 RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQEDSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRD--IDDHVTLESE--------LGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQR 143
            +YI +VVP +C  GDDEQHGS+V+ DVAVLQALS+RVH GKFVAESK+  D   YQ L  A D  GV+  L N+ VE KVL+RA +KA+TYG D  + D   L  E        LG     + KV    +  IY++ +IPLTKDVE+ YLF+R
Sbjct:  138 KYIEDVVPAICAKGDDEQHGSSVLNDVAVLQALSKRVHYGKFVAESKYLGDPDAYQALVDANDAEGVMKLLTNEAVELKVLRRARLKAATYGTDPLLADLPPLYGEQKGIPSIALGDDGSEDNKVCALTVEIIYRDLIIPLTKDVEVAYLFRR 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144546.3055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ27_ECTSI3.690e-7270.37Chorismate mutase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CAA2_9STRA1.630e-5760.26Chorismate mutase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6U1P8R8_9STRA9.220e-4953.21Chorismate mutase n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A4D9CWZ2_9STRA1.640e-4655.70Chorismate mutase n=1 Tax=Nannochloropsis salina C... [more]
W7U1H9_9STRA3.000e-4455.03Chorismate mutase n=1 Tax=Nannochloropsis gaditana... [more]
A0A7S2VZ80_9STRA6.870e-4146.37Chorismate mutase n=1 Tax=Eucampia antarctica TaxI... [more]
A0A0G4FZ06_9ALVE7.030e-3948.05Chorismate mutase n=1 Tax=Chromera velia CCMP2878 ... [more]
A0A7S3V864_9STRA2.530e-3845.71Chorismate mutase n=1 Tax=Chaetoceros debilis TaxI... [more]
A0A7S2SIA4_9STRA1.920e-3747.22Chorismate mutase n=1 Tax=Rhizochromulina marina T... [more]
A0A1E7FY19_9STRA3.470e-3751.63Chorismate mutase (Fragment) n=1 Tax=Fragilariopsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037039Chorismate mutase, AroQ class superfamily, eukaryoticGENE3D1.10.590.10coord: 1..144
e-value: 5.7E-51
score: 175.2
IPR008238Chorismate mutase, AroQ class, eukaryotic typePANTHERPTHR21145CHORISMATE MUTASEcoord: 2..143
IPR008238Chorismate mutase, AroQ class, eukaryotic typePROSITEPS51169CHORISMATE_MUT_3coord: 1..145
score: 40.683
IPR036263Chorismate mutase type II superfamilySUPERFAMILY48600Chorismate mutase IIcoord: 2..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144546contigH-elongata_contig144546:294..1252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144546.3055.1mRNA_H-elongata_contig144546.3055.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144546 294..1252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144546.3055.1 ID=prot_H-elongata_contig144546.3055.1|Name=mRNA_H-elongata_contig144546.3055.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
RYISEVVPLVCLPGDDEQHGSAVVCDVAVLQALSRRVHLGKFVAESKFQE
DSGKYQELCRAGDVRGVLAELENKPVEKKVLQRAFVKASTYGRDIDDHVT
LESELGLQEHRNFKVDPHGIVKIYQEFVIPLTKDVEIMYLFQRTGYPCPS
LEGLHDLHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037039CM_AroQ_sf_eucaryotic
IPR008238Chorismate_mutase_AroQ_euk
IPR036263Chorismate_II_sf