prot_H-elongata_contig143643.3005.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig143643.3005.1
Unique Name	prot_H-elongata_contig143643.3005.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	238

Homology

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A0U1XAH8_SARHM (Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XAH8_SARHM)

HSP 1 Score: 434 bits (1117), Expect = 4.700e-149
Identity = 212/234 (90.60%), Postives = 224/234 (95.73%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPALSGKTR 234
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGL YPE+LGQIHFWLMF+GVNLTFFPMHFLGLAGMPRRIPDYPDSY GWNS+ASFGSILSSVASLFFFYIVYLTLT+G +EESNPWVK+RG+AFP +  K+R
Sbjct:  298 MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLGYPEVLGQIHFWLMFIGVNLTFFPMHFLGLAGMPRRIPDYPDSYAGWNSVASFGSILSSVASLFFFYIVYLTLTEGHLEESNPWVKNRGIAFPTIESKSR 528

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 2.160e-146
Identity = 206/230 (89.57%), Postives = 220/230 (95.65%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPALS 230
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMF AFYFW+GKMTGL YPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSY GWN +ASFGSILSS+ASLFFF++VYLTLTQGS+E+SNPWV  RGLAFP+L+
Sbjct:  195 MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATLWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMTGLTYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYAGWNGVASFGSILSSIASLFFFFVVYLTLTQGSVEKSNPWVSGRGLAFPSLA 421

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A0S2I710_SACJA (Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina japonica TaxID=88149 RepID=A0A0S2I710_SACJA)

HSP 1 Score: 427 bits (1097), Expect = 5.930e-146
Identity = 208/229 (90.83%), Postives = 220/229 (96.07%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPAL 229
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIAT+WGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMF AFYFW+GKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSY GWN +ASFGSILSS+ASLFFF++VY+TLT+GS+EESNPWVK RGLAFP L
Sbjct:  298 MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYAGWNGLASFGSILSSIASLFFFFVVYITLTRGSVEESNPWVKGRGLAFPVL 523

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 6.190e-145
Identity = 205/230 (89.13%), Postives = 221/230 (96.09%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPALS 230
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIAT+WGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSG+DIALHDTYYVVAHFHYVLSMGAAFTMF AFYFW+GKMTGL YPE+LGQIHFWLMF+GVNLTFFPMHFLGLAGMPRRIPDYPDSY GWN IASFGSILSS+ASLFFF++VY+TLT+GS+EE+NPWVK RGLAFPAL+
Sbjct:  299 MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGIDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMTGLTYPEVLGQIHFWLMFIGVNLTFFPMHFLGLAGMPRRIPDYPDSYAGWNGIASFGSILSSLASLFFFFVVYVTLTKGSVEEANPWVKGRGLAFPALT 525

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A8E8PDM6_9PHAE (Cytochrome c oxidase subunit 1 n=2 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PDM6_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 1.490e-142
Identity = 201/229 (87.77%), Postives = 219/229 (95.63%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPAL 229
            M+YAMLSIGVLGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIAT+WGGSIRLKTPMLFSIGFLFLFT+GGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMF  FY+W+GKM+GL+YPE+LGQIHFWLMF+GVNLTFFPMHFLGLAGMPRRIPDYPD+Y GWNSIASFGSILSS+ASLFFF++VY+TLTQGS+EESNPWVK RGLAF  +
Sbjct:  291 MIYAMLSIGVLGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTVGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAGFYYWIGKMSGLSYPEVLGQIHFWLMFVGVNLTFFPMHFLGLAGMPRRIPDYPDAYAGWNSIASFGSILSSIASLFFFFVVYITLTQGSVEESNPWVKGRGLAFSPI 516

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A5K7TLP3_9PHAE (Cytochrome c oxidase subunit 1 n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A5K7TLP3_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 1.440e-141
Identity = 201/234 (85.90%), Postives = 222/234 (94.87%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPALSGKTR 234
            MVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFT ATMIIAVPT    IKIFSWIAT+WGGSIR+KTPMLFSIGFLFLFTIGGLTGVVLANSG+DIALHDTYYVVAHFHYVLSMGAAFTMF AFYFW+GK+TGLAYPEILGQIHFWLMF+GVNLTFFPMHFLGLAGMPRRIPDYPDS+GGWN++ASFGSILSS+AS+FFFY+VY+TLT+GS+EESNPWVK RGLAF   + K +
Sbjct:  303 MVYAMISIGILGFIVWAHHMFTVGLDIDTRAYFTGATMIIAVPTG---IKIFSWIATLWGGSIRVKTPMLFSIGFLFLFTIGGLTGVVLANSGLDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKITGLAYPEILGQIHFWLMFIGVNLTFFPMHFLGLAGMPRRIPDYPDSFGGWNAVASFGSILSSLASIFFFYVVYVTLTRGSVEESNPWVKGRGLAFMIPTSKLK 533

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A8F0K0Q8_9PHAE (Cytochrome c oxidase subunit 1 n=5 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0Q8_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 2.130e-139
Identity = 198/235 (84.26%), Postives = 222/235 (94.47%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPALSGKTRE 235
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSW+AT+WGGSIR+KTPMLFSIGFLFLFTIGGLTGVVLANSG+DI+LHDTYYVVAHFHYVLSMGAAFTMF AFY+WVGKMTGLAYPE+LGQIHFWLMFLGVN+TFFPMHFLGLAGMPRR+PDYPDS+ GWN++ASFGSILSSVASLFFF++VY+TLTQGS+ +SN WV+ RGLAFP L  ++ +
Sbjct:  298 MVYAMLSIGMLGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWVATLWGGSIRIKTPMLFSIGFLFLFTIGGLTGVVLANSGLDISLHDTYYVVAHFHYVLSMGAAFTMFAAFYYWVGKMTGLAYPEVLGQIHFWLMFLGVNITFFPMHFLGLAGMPRRVPDYPDSFFGWNALASFGSILSSVASLFFFFVVYITLTQGSVVKSNYWVEGRGLAFPPLPRRSSQ 529

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A1L6KY02_9PHAE (Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY02_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 1.430e-135
Identity = 195/234 (83.33%), Postives = 209/234 (89.32%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPALSGKTR 234
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFW+GKMTGL YPE+LGQIHFWLMF+GVNLTFFPMHFLGLAGMPRRIPDYPDSY GWNS+AS              Y+VYLTLTQG +E+SNPWV++RG+AFP +  K R
Sbjct:  298 MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWIGKMTGLGYPEVLGQIHFWLMFIGVNLTFFPMHFLGLAGMPRRIPDYPDSYAGWNSVASXXXXXXXXXXXXXXYVVYLTLTQGHLEDSNPWVENRGVAFPVIQSKKR 528

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: Q2TUB0_DICDH (Cytochrome c oxidase subunit 1 n=32 Tax=Phaeophyceae TaxID=2870 RepID=Q2TUB0_DICDH)

HSP 1 Score: 383 bits (983), Expect = 5.090e-129
Identity = 184/210 (87.62%), Postives = 204/210 (97.14%), Query Frame = 0

Query:    1 MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQG 210
            MVYAMLSIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPT    IKIFSWIATMWGGS++L+TP+LFSIGFLFLFT+GGLTGVVLANSG+DIALHDTYYVVAHFHYVLSMGAAFTMF AFYFW+GK+TGL+YPEILG+IHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPD+Y GWN++ASFGSILS++ASLFFFYIVY+TLT+G
Sbjct:  297 MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTG---IKIFSWIATMWGGSVKLETPVLFSIGFLFLFTVGGLTGVVLANSGIDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKITGLSYPEILGRIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDAYSGWNAVASFGSILSALASLFFFYIVYITLTEG 503

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BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Match: A0A6N3IW01_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Ecklonia arborea TaxID=1849970 RepID=A0A6N3IW01_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 5.410e-128
Identity = 181/204 (88.73%), Postives = 189/204 (92.65%), Query Frame = 0

Query:   26 DVDTRAYFTAATMIIAVPTXXXXIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFFYIVYLTLTQGSIEESNPWVKDRGLAFPAL 229
            D+ TRAYFTAATMIIAVPT    IKIFSW+AT+WGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMF AFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPD Y GWN +ASFGSILSSVASL FF+IVY+TLT+G +E SNPWVKDR  AFP L
Sbjct:    1 DIGTRAYFTAATMIIAVPTG---IKIFSWVATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWVGKMTGLAYPEILGQIHFWLMFLGVNLTFFPMHFLGLAGMPRRIPDYPDCYAGWNGLASFGSILSSVASLLFFFIVYITLTRGYVEGSNPWVKDRKFAFPLL 201

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot

BLAST of mRNA_H-elongata_contig143643.3005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0U1XAH8_SARHM	4.700e-149	90.60	Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyc...	[more]
A0A0U4ZTN0_9PHAE	2.160e-146	89.57	Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=...	[more]
A0A0S2I710_SACJA	5.930e-146	90.83	Cytochrome c oxidase subunit 1 n=14 Tax=Saccharina...	[more]
E6ZES6_ECTSI	6.190e-145	89.13	Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyc...	[more]
A0A8E8PDM6_9PHAE	1.490e-142	87.77	Cytochrome c oxidase subunit 1 n=2 Tax=Phaeophycea...	[more]
A0A5K7TLP3_9PHAE	1.440e-141	85.90	Cytochrome c oxidase subunit 1 n=55 Tax=Phaeophyce...	[more]
A0A8F0K0Q8_9PHAE	2.130e-139	84.26	Cytochrome c oxidase subunit 1 n=5 Tax=Laminariale...	[more]
A0A1L6KY02_9PHAE	1.430e-135	83.33	Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum f...	[more]
Q2TUB0_DICDH	5.090e-129	87.62	Cytochrome c oxidase subunit 1 n=32 Tax=Phaeophyce...	[more]
A0A6N3IW01_9PHAE	5.410e-128	88.73	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 33..54 score: 46.04 coord: 9..24 score: 83.14 coord: 71..89 score: 67.54 coord: 99..118 score: 87.74 coord: 149..170 score: 81.87
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 1..190 e-value: 2.1E-66 score: 224.6
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..222
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..235 e-value: 2.3E-99 score: 335.1
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..220
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..222
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 69..90
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 58..68
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 165..183
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 102..127
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 139..164
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 91..101
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..57
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 208..237
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 184..207
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..17
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..138
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 141..163
None	No IPR available	TMHMM	TMhelix		coord: 34..56
None	No IPR available	TMHMM	TMhelix		coord: 106..128
None	No IPR available	TMHMM	TMhelix		coord: 183..205
None	No IPR available	TMHMM	TMhelix		coord: 2..24
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..227 score: 49.952

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig143643	contig	H-elongata_contig143643:35..748 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig143643.3005.1	mRNA_H-elongata_contig143643.3005.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig143643 2..898 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig143643.3005.1 ID=prot_H-elongata_contig143643.3005.1|Name=mRNA_H-elongata_contig143643.3005.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
MVYAMLSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTXXXXIK
IFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHD
TYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMTGLAYPEILGQIHFWLMFL
GVNLTFFPMHFLGLAGMPRRIPDYPDSYGGWNSIASFGSILSSVASLFFF
YIVYLTLTQGSIEESNPWVKDRGLAFPALSGKTREDF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023616	Cyt_c_oxase-like_su1_dom