prot_H-elongata_contig140898.2832.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig140898.2832.1
Unique Nameprot_H-elongata_contig140898.2832.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
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BLAST of mRNA_H-elongata_contig140898.2832.1 vs. uniprot
Match: D8LTZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ0_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.470e-19
Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 0 
Query:    1 PVAALQCFSCTDCSVGGALFGQKEQCGPMEIFCASVHRQKRVGRMGHSS-VDRGCASSLNVAC 62
            PV ALQCFSCTDCSVGGAL  QK+QC P E FCA+V R +    +  SS VDRGCASSLNVAC
Sbjct:   31 PVLALQCFSCTDCSVGGALSAQKQQCPPGEAFCAAVSRPRTSPLVYQSSSVDRGCASSLNVAC 93
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BLAST of mRNA_H-elongata_contig140898.2832.1 vs. uniprot
Match: A0A6H5JS55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS55_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.380e-17
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0 
Query:    1 PVAALQCFSCTDCSVGGALFGQKEQCGPMEIFCASVHRQKRVGRMGHSS-VDRGCASSLNVAC 62
            PV ALQ FSCTDCSVGGAL  QK+QC P E FCA+V R +    +  SS VDRGCASSL+VAC
Sbjct:   73 PVLALQYFSCTDCSVGGALSAQKQQCPPGETFCAAVSRPRTSPLVYQSSSVDRGCASSLHVAC 135
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140898.2832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTZ0_ECTSI1.470e-1969.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS55_9PHAE5.380e-1766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig140898contigH-elongata_contig140898:92..796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig140898.2832.1mRNA_H-elongata_contig140898.2832.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig140898 92..796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig140898.2832.1 ID=prot_H-elongata_contig140898.2832.1|Name=mRNA_H-elongata_contig140898.2832.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
PVAALQCFSCTDCSVGGALFGQKEQCGPMEIFCASVHRQKRVGRMGHSSV
DRGCASSLNVAC
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