prot_H-elongata_contig140119.2794.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig140119.2794.1
Unique Nameprot_H-elongata_contig140119.2794.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length129
Homology
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.720e-55
Identity = 103/113 (91.15%), Postives = 110/113 (97.35%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVI 123
            +VGLLLSLKMLLLPLLLGVCLDATTL LFG TGE+RA+FMAQHLVGSLLLHWV+GITFMLFVTVSVLQLREVVHP++LSLIIRPQEPHPDLLGSLLQ+SGRTHARRMAMSL I
Sbjct:  753 KVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAI 865          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.530e-54
Identity = 102/113 (90.27%), Postives = 108/113 (95.58%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVI 123
            +VGLLLSLKMLLLPLLLG CLDATTL LFG TGE+R +FMAQHLVGSLLLHWV+GITFMLFVTVSVLQLREVVHPD+LSLIIRPQEPHPDLLGSLLQ+SGRTHARRMAMSL I
Sbjct:  837 KVGLLLSLKMLLLPLLLGGCLDATTLPLFGCTGEARVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAI 949          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A7S2RW40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.380e-46
Identity = 90/116 (77.59%), Postives = 100/116 (86.21%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVISVF 126
            +VG+LL LKMLLLPLLLGVCLDA TL LF ++   R  F AQ+LVGSLLLHWV+GITFMLFVTVSVLQLREV+HPD+ + IIRPQEPHPDLLGSLLQ+SG THARRM MSL I VF
Sbjct:  602 KVGILLFLKMLLLPLLLGVCLDAATLRLFTASAAERVHFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVLHPDIFAAIIRPQEPHPDLLGSLLQESGATHARRMIMSLAIYVF 717          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A835YNH4_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.200e-45
Identity = 89/115 (77.39%), Postives = 99/115 (86.09%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVISV 125
            +VGLLLSLKMLLLPLLLG CLDA  L +F ++   R  F+  +L GSLLLHWVMGITFMLFVTVSVLQLREVVHPD+L+ +IRPQEPHPDLLGSLLQ+SGRTHARRMAMSL I V
Sbjct:  767 KVGLLLSLKMLLLPLLLGACLDAAALPIFAASPADRLHFLRTNLAGSLLLHWVMGITFMLFVTVSVLQLREVVHPDVLAGVIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYV 881          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A7S2CYG7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYG7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 5.930e-41
Identity = 80/115 (69.57%), Postives = 98/115 (85.22%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVISV 125
            +VG+LL LKMLLLPLLLGVCLDA+TL +FG++ + R +F AQ+LVGSLLLHWV+GITFMLFVTVSVLQLREV+HPD+L+ +IRPQ+PH      LL++SG THARRM MSL I +
Sbjct:  423 KVGILLFLKMLLLPLLLGVCLDASTLMVFGTSAKDRIRFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVMHPDILASVIRPQDPHXXXXXXLLRESGGTHARRMVMSLAIYI 537          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A7S2MEA0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEA0_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.650e-39
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVI 123
            +VG+LL LKMLLLPLLLG+ LDA+TLSLFGS+   R  +  + L GS+LLHWV GITFML VTVSVLQLREV HPDLL+ IIRPQEP PDLLG+LLQ+SG THA+RM +SL I
Sbjct:   11 KVGVLLFLKMLLLPLLLGIWLDASTLSLFGSSVNERILYAGKDLFGSILLHWVAGITFMLIVTVSVLQLREVTHPDLLASIIRPQEPQPDLLGNLLQESGTTHAKRMVLSLCI 123          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A7S4W2J4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W2J4_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.200e-38
Identity = 80/113 (70.80%), Postives = 93/113 (82.30%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVI 123
            +VG+LL LKMLLLPLLLG+ LDA+TLSLFGS+   R  +    L GS+LLHWV GITFML VTVSVLQLREV HPDLL+ +IRPQEP PDLLG+LLQ+SG THA+RM +SL I
Sbjct:  696 KVGVLLFLKMLLLPLLLGIWLDASTLSLFGSSLNERILYAGSDLFGSILLHWVAGITFMLIVTVSVLQLREVAHPDLLARVIRPQEPQPDLLGNLLQESGATHAKRMLLSLGI 808          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: W7U493_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U493_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.440e-37
Identity = 79/115 (68.70%), Postives = 92/115 (80.00%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVISV 125
            +VG+LL  KM L PLLLG+ LDA T  + G     R +F  ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HPD+L+ IIRPQEP PDLLGSLLQ+SG THARRMA+SL I V
Sbjct:  235 KVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYV 349          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A4D9D1W8_9STRA (RING-CH-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W8_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.840e-37
Identity = 79/115 (68.70%), Postives = 92/115 (80.00%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVISV 125
            +VG+LL  KM L PLLLG+ LDA T  + G     R +F  ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HPD+L+ IIRPQEP PDLLGSLLQ+SG THARRMA+SL I V
Sbjct:  448 KVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYV 562          
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Match: A0A7S3PCV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PCV0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.910e-36
Identity = 74/113 (65.49%), Postives = 91/113 (80.53%), Query Frame = 0
Query:   11 QVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFMAQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPDLLGSLLQQSGRTHARRMAMSLVI 123
            +VGLLL +KM LLP++LGV LDA+T++L G T E R  +  + L  SLLLHWV GITFML VTVSVLQLREV+HPDLL+ +IRPQEP PDLLG+LL ++  THA+RM +SLVI
Sbjct:  128 KVGLLLFMKMFLLPIVLGVALDASTVNLLGGTVEDRIAYAGKDLFSSLLLHWVAGITFMLLVTVSVLQLREVMHPDLLAQVIRPQEPQPDLLGNLLHETASTHAKRMLLSLVI 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140119.2794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR1_ECTSI1.720e-5591.15RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JWM1_9PHAE1.530e-5490.27RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S2RW40_9STRA3.380e-4677.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YNH4_9STRA2.200e-4577.39RING-CH-type domain-containing protein n=1 Tax=Tri... [more]
A0A7S2CYG7_9STRA5.930e-4169.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2MEA0_9STRA1.650e-3971.68Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4W2J4_9STRA1.200e-3870.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
W7U493_9STRA4.440e-3768.70Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9D1W8_9STRA4.840e-3768.70RING-CH-type domain-containing protein n=1 Tax=Nan... [more]
A0A7S3PCV0_9STRA3.910e-3665.49Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13145:SF0E3 UBIQUITIN-PROTEIN LIGASE MARCH6coord: 11..123
NoneNo IPR availablePANTHERPTHR13145SSM4 PROTEINcoord: 11..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..128
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig140119contigH-elongata_contig140119:791..1668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig140119.2794.1mRNA_H-elongata_contig140119.2794.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig140119 791..1668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig140119.2794.1 ID=prot_H-elongata_contig140119.2794.1|Name=mRNA_H-elongata_contig140119.2794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp
LLWARAIDSSQVGLLLSLKMLLLPLLLGVCLDATTLSLFGSTGESRAKFM
AQHLVGSLLLHWVMGITFMLFVTVSVLQLREVVHPDLLSLIIRPQEPHPD
LLGSLLQQSGRTHARRMAMSLVISVFGG*
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