prot_H-elongata_contig139197.2730.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139197.2730.1
Unique Nameprot_H-elongata_contig139197.2730.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length97
Homology
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BLAST of mRNA_H-elongata_contig139197.2730.1 vs. uniprot
Match: D8LRC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC7_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.220e-40
Identity = 71/90 (78.89%), Postives = 83/90 (92.22%), Query Frame = 0 
Query:    1 ETKESLRKEYLETESPPDETIIGMQRSMLRTLGFAPDHGVACLNTFSKDYPENLKLQMRLRQFMQCASMGRQEAILGKEEMTKRMQMQQV 90
            ETKESLRKE+LET+ PPDETI+GMQRSMLRTLGF+PDHGVACLN FSKD+P++ KLQMRL+QFM+CASM RQEA+LGKEE+TKRM + Q 
Sbjct:  223 ETKESLRKEFLETQVPPDETIVGMQRSMLRTLGFSPDHGVACLNAFSKDFPDDEKLQMRLQQFMRCASMARQEAMLGKEELTKRMHVHQA 312
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BLAST of mRNA_H-elongata_contig139197.2730.1 vs. uniprot
Match: A0A835ZBF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF2_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.660e-7
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0 
Query:    1 ETKESLRKEYLETESPPDETIIGMQRSMLRTLGFAPDHGVACLNTFSKDYPENLKLQMRLRQFMQCASMGRQEAILGKEEMTKRMQMQ 88
            ETK  L + + ET+ PP++ II MQR ML  LG  PDHG++CLN        +  +    ++F   A    QEA++G ++    M  Q
Sbjct:  175 ETKAKLAQRFAETQEPPNDYIIEMQRDMLACLGIEPDHGISCLNKHVTS--GDADIASGAQRFAMSAQRACQEAVMGTDKFEAHMAQQ 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139197.2730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRC7_ECTSI1.220e-4078.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBF2_9STRA1.660e-736.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139197contigH-elongata_contig139197:462..1430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139197.2730.1mRNA_H-elongata_contig139197.2730.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139197 462..1430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139197.2730.1 ID=prot_H-elongata_contig139197.2730.1|Name=mRNA_H-elongata_contig139197.2730.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
ETKESLRKEYLETESPPDETIIGMQRSMLRTLGFAPDHGVACLNTFSKDY
PENLKLQMRLRQFMQCASMGRQEAILGKEEMTKRMQMQQVEDRQAS*
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