prot_H-elongata_contig135814.2528.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135814.2528.1
Unique Nameprot_H-elongata_contig135814.2528.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5JHJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.400e-17
Identity = 42/77 (54.55%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    1 ASDLHTPASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAP-IYQLPENVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            ASDL  P S  +A  S    +W  SM  EF GLL+ GTF P +  L EN I AKWV++WK DE GW  K KSRLVAR
Sbjct:  433 ASDLRVPKSYKEAMASEHRHLWSDSMQREFNGLLEAGTFTPAMLHLVENAIHAKWVFDWKADEFGWPTKVKSRLVAR 509          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5KFW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW5_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.190e-15
Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    3 DLHT-PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            D+ T P S  +A  S  A I   +M +EF+GLL+ GTFA   + P   NVIDA+WVY WK DE G +VKAK+RLVA+
Sbjct:   26 DVETEPGSYREARQSKHAVISDKAMPAEFEGLLRAGTFALAVKAPMGCNVIDARWVYKWKADETGKIVKAKARLVAK 102          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.460e-14
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A  S  A IW  +M++E +GL++ GTF    ++PE  NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  213 PGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAK 284          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.480e-14
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A  S  A IW  +M++E +GL++ GTF    ++PE  NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  418 PGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAK 489          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.480e-14
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A+ S  AKIW  +M++E +GL++ GTF    ++P   NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  448 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAK 519          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.490e-14
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A  S  A IW  +M++E +GL++ GTF    ++PE  NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  482 PGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAK 553          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.490e-14
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A  S  A IW  +M++E +GL++ GTF    ++PE  NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  626 PGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAK 697          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.500e-14
Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A  S  A IW  +M++E +GL++ GTF    ++PE  NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  832 PGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAK 903          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.500e-14
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P S  +A+ S  AKIW  +M++E +GL++ GTF    ++P   NVIDA+WV+ WK DE G +VKAK+RLVA+
Sbjct:  715 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAK 786          
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Match: A0A6H5KLE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE6_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.280e-14
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    7 PASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPE--NVIDAKWVYNWKVDEQGWVVKAKSRLVAR 76
            P+S ++A  S  + IW  ++++EF GLL+ GTFA   ++P   NVIDA+WVY WK +E G ++KAK+RLVA+
Sbjct:   15 PSSYNEARQSKYSSIWDKAISAEFGGLLRAGTFALAVKIPIGCNVIDARWVYKWKANETGKILKAKARLVAK 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135814.2528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHJ3_9PHAE1.400e-1754.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFW5_9PHAE3.190e-1551.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV80_9PHAE2.460e-1450.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LDZ0_9PHAE2.480e-1450.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKK1_9PHAE2.480e-1450.00Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5J594_9PHAE2.490e-1450.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE2.490e-1450.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K622_9PHAE2.500e-1450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL9_9PHAE2.500e-1450.00Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KLE6_9PHAE3.280e-1448.61Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135814contigH-elongata_contig135814:7..234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135814.2528.1mRNA_H-elongata_contig135814.2528.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135814 7..234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135814.2528.1 ID=prot_H-elongata_contig135814.2528.1|Name=mRNA_H-elongata_contig135814.2528.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
ASDLHTPASVHDAETSPQAKIWRHSMNSEFQGLLQVGTFAPIYQLPENVI
DAKWVYNWKVDEQGWVVKAKSRLVAR
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