prot_H-elongata_contig133218.2361.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig133218.2361.1
Unique Name	prot_H-elongata_contig133218.2361.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	105

Homology

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.320e-58
Identity = 99/105 (94.29%), Postives = 104/105 (99.05%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            QDV+LLIADELHLLGGPEGPTLE+VVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLE++L GFDVNHFGSRMLAMAKPAYN+V
Sbjct: 1494 QDVALLIADELHLLGGPEGPTLEVVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLEIKLHGFDVNHFGSRMLAMAKPAYNYV 1598

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A835YNN3_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN3_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.260e-41
Identity = 72/105 (68.57%), Postives = 85/105 (80.95%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q VSLL+ D++HLLGG EGP LE+VVSR RY++SQ E+ CRIV L + LANAKDVG+W+GA +HSL +F P  RP PLELRLQGFDV HFGSR+LAMAKP Y  V
Sbjct: 1501 QQVSLLVVDDIHLLGGKEGPVLEVVVSRARYVASQTERACRIVALGSPLANAKDVGEWMGAPSHSLFNFHPSARPSPLELRLQGFDVGHFGSRLLAMAKPTYQAV 1605

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A7S4DAU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAU8_HETAK)

HSP 1 Score: 154 bits (390), Expect = 1.700e-41
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q+V+L + DELHLLG  EGP LE+VVSR RY++SQLE+K RIVGLS+SLANAKDVGDW+GATAHS  +F P+VRPVPLEL +QG DV HFGSRMLA  K  YN +
Sbjct:  807 QEVALFLVDELHLLGAAEGPALEVVVSRARYVASQLERKVRIVGLSSSLANAKDVGDWMGATAHSNFNFHPNVRPVPLELFIQGSDVGHFGSRMLAFGKTVYNAI 911

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A7S4K3C1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K3C1_GUITH)

HSP 1 Score: 152 bits (385), Expect = 7.960e-41
Identity = 68/105 (64.76%), Postives = 89/105 (84.76%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q+VSL I DE+HL+GG +GP LE++ SRMRYI SQ E+K RIV LSAS+ANAKD+G+WIGA++HSL SF P+VRP+PLE+ +QGFD+ H+ SR+LAM+KP YN +
Sbjct:  708 QNVSLFIVDEIHLIGGDKGPVLEVITSRMRYIGSQTEQKTRIVALSASVANAKDLGEWIGASSHSLYSFHPNVRPIPLEIHIQGFDIPHYASRILAMSKPMYNAI 812

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: L1K0L5_GUITC (Uncharacterized protein n=4 Tax=Geminigeraceae TaxID=589343 RepID=L1K0L5_GUITC)

HSP 1 Score: 152 bits (385), Expect = 8.120e-41
Identity = 68/105 (64.76%), Postives = 89/105 (84.76%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q+VSL I DE+HL+GG +GP LE++ SRMRYI SQ E+K RIV LSAS+ANAKD+G+WIGA++HSL SF P+VRP+PLE+ +QGFD+ H+ SR+LAM+KP YN +
Sbjct: 1391 QNVSLFIVDEIHLIGGDKGPVLEVITSRMRYIGSQTEQKTRIVALSASVANAKDLGEWIGASSHSLYSFHPNVRPIPLEIHIQGFDIPHYASRILAMSKPMYNAI 1495

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: D6PNI9_9BRAS (AT1G20960-like protein (Fragment) n=1 Tax=Neslia paniculata TaxID=98023 RepID=D6PNI9_9BRAS)

HSP 1 Score: 139 bits (351), Expect = 6.210e-40
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q VSL I DELHL+GG  GP LE++VSRMRYISSQ+  K RIV LS SLANAKD+G+WIGA++H L +F P VRPVPLE+ +QG D++ F +RM AM KP Y  +
Sbjct:    1 QQVSLFIVDELHLIGGLGGPVLEVIVSRMRYISSQVNNKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDISSFEARMQAMTKPTYTAI 105

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A2K3KB46_TRIPR (U5 small nuclear ribonucleoprotein 200 kDa helicase-like protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KB46_TRIPR)

HSP 1 Score: 142 bits (357), Expect = 7.890e-40
Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q VSL I DELHL+GG  GP LE++VSRMRYI+SQ+E K RIV LS SLANAKD+G+WIGAT+H L +F P VRPVPLE+ +QG D+ +F +RM AM KP Y  +
Sbjct:   73 QQVSLFIIDELHLIGGQGGPILEVIVSRMRYIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSI 177

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A7S2BE45_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE45_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.470e-39
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYNHV 105
            Q+V+L I DE+HL+GG EGPTLE+V SRMRY++ Q ++  RIV L  S+ANAKDVGDW+GAT H L SF P VRPVPL++ + G D++HFGSRMLAMAKPA++ +
Sbjct: 1359 QEVALCIVDEVHLIGGSEGPTLEVVASRMRYVADQTDRAARIVALGTSMANAKDVGDWLGATGHGLFSFHPQVRPVPLDMFVHGLDISHFGSRMLAMAKPAFSAI 1463

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A7S4F5U3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F5U3_CHRCT)

HSP 1 Score: 147 bits (372), Expect = 4.600e-39
Identity = 67/102 (65.69%), Postives = 85/102 (83.33%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAY 102
            Q+VSLLI DE+HL+GG  GP LE+V+SRMRYISSQ+E +CRIV LS SLANAKD+ +WIG ++H + +F  +VRPVPLE+ +QGFD+ H  SR+LAMAKPAY
Sbjct: 1463 QNVSLLIVDEMHLIGGEVGPVLEVVISRMRYISSQMESRCRIVALSTSLANAKDLAEWIGCSSHGIFNFHSNVRPVPLEIHIQGFDIAHVPSRLLAMAKPAY 1564

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BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Match: A0A7S1ST31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1ST31_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 6.100e-39
Identity = 64/103 (62.14%), Postives = 80/103 (77.67%), Query Frame = 0

Query:    1 QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLANAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKPAYN 103
            Q+V+L I DELHLLGG  GP LE+V SRMRYIS+Q EK  RI+GL  SLANAKD+G+WIGA  H L +F P VRPVPL + +QGFD+ +F +RM AM++P Y+
Sbjct:  125 QNVALFIVDELHLLGGQNGPALEVVTSRMRYISAQTEKNIRIIGLCTSLANAKDLGEWIGAGTHGLFNFAPGVRPVPLSIHIQGFDIANFEARMKAMSRPTYS 227

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot

BLAST of mRNA_H-elongata_contig133218.2361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LHW4_ECTSI	1.320e-58	94.29	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YNN3_9STRA	1.260e-41	68.57	Sec63 Brl domain-containing protein n=1 Tax=Tribon...	[more]
A0A7S4DAU8_HETAK	1.700e-41	70.48	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S4K3C1_GUITH	7.960e-41	64.76	Hypothetical protein (Fragment) n=1 Tax=Guillardia...	[more]
L1K0L5_GUITC	8.120e-41	64.76	Uncharacterized protein n=4 Tax=Geminigeraceae Tax...	[more]
D6PNI9_9BRAS	6.210e-40	62.86	AT1G20960-like protein (Fragment) n=1 Tax=Neslia p...	[more]
A0A2K3KB46_TRIPR	7.890e-40	63.81	U5 small nuclear ribonucleoprotein 200 kDa helicas...	[more]
A0A7S2BE45_9STRA	2.470e-39	62.86	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
A0A7S4F5U3_CHRCT	4.600e-39	65.69	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A7S1ST31_9CHLO	6.100e-39	62.14	Hypothetical protein (Fragment) n=1 Tax=Tetraselmi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..74 e-value: 8.0E-26 score: 92.5
None	No IPR available	PANTHER	PTHR24075	FAMILY NOT NAMED	coord: 1..105
None	No IPR available	PANTHER	PTHR24075:SF5	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE	coord: 1..105
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig133218	contig	H-elongata_contig133218:515..1120 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig133218.2361.1	mRNA_H-elongata_contig133218.2361.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig133218 515..1120 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig133218.2361.1 ID=prot_H-elongata_contig133218.2361.1|Name=mRNA_H-elongata_contig133218.2361.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
QDVSLLIADELHLLGGPEGPTLEIVVSRMRYISSQLEKKCRIVGLSASLA
NAKDVGDWIGATAHSLVSFRPDVRPVPLELRLQGFDVNHFGSRMLAMAKP
AYNHV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase