prot_H-elongata_contig132754.2343.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132754.2343.1
Unique Nameprot_H-elongata_contig132754.2343.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A6H5J7V5_9PHAE (VHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7V5_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.100e-32
Identity = 66/88 (75.00%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L+EV+R+LRK+LGS    VLSV+LTLAETLVKNC   V +E+ASERFMAA++KIARTYSFK +R S+AIADQ+LDIIQAWGEAFLPRR
Sbjct:   58 LTEVIRILRKKLGSSNTTVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKIARTYSFKPNRQSLAIADQSLDIIQAWGEAFLPRR 145          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A7S2CD66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CD66_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.510e-22
Identity = 46/89 (51.69%), Postives = 67/89 (75.28%), Query Frame = 0
Query:    3 RLSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            RLSE VR++RKR+  + P+V+  SLTL ETLVKNC      +VA+++FM +M+ +ART+  K  R  + +AD+AL++IQAWGEAF+P+R
Sbjct:    2 RLSEAVRLIRKRIQHKNPRVVMTSLTLTETLVKNCHTAFHTQVATKKFMDSMAAVARTFGSKMGRDELEVADKALELIQAWGEAFMPQR 90          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A4D9CTC8_9STRA (VHS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTC8_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.040e-21
Identity = 44/84 (52.38%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    6 EVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLP 89
            E++R +RKRL  +  +V+ ++L L ET+VKNCG  V KEVA+ +FMA M+++ARTYS +T + ++ +AD+A+D+IQ+WGEAFLP
Sbjct:   64 EIIRQIRKRLQHRSTRVVHMALELIETVVKNCGPSVHKEVATPKFMATMARVARTYSERTGKENLQVADKAMDLIQSWGEAFLP 147          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A835YSD0_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD0_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.400e-20
Identity = 44/88 (50.00%), Postives = 67/88 (76.14%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            ++EVVR +RKRL  +   V+ ++LTL ETLVKNCG  + +E+A E FM  M+ +A+ ++ +TSR S+ +A++ LD+IQ+WGEAFLP+R
Sbjct:   63 VAEVVRAVRKRLAHKSIPVVMLALTLTETLVKNCGMPLHREIAKENFMQDMTVLAKRHTTRTSRESLQVANKTLDLIQSWGEAFLPQR 150          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A0P1AM73_PLAHL (VHS domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM73_PLAHL)

HSP 1 Score: 89.4 bits (220), Expect = 8.030e-19
Identity = 45/88 (51.14%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L E +R LR RLG    +V+ ++LTL E++VKNCG  V +E+A+E+FM+ M ++ RT+S K  R S+ IA + LD++QAWGEAFLP R
Sbjct:   78 LKESIRYLRLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEQFMSEMEELHRTHSNKRGRQSMEIASRVLDMVQAWGEAFLPFR 165          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: W2PST9_PHYPN (VHS domain-containing protein n=56 Tax=Phytophthora TaxID=4783 RepID=W2PST9_PHYPN)

HSP 1 Score: 86.7 bits (213), Expect = 6.770e-18
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L E +R L+ RLG    +V+ ++LTL E++VKNCG  V +E+A+E+FM  M  + RT++ K  R S+ IA + LD+IQAWGEAFLP R
Sbjct:    2 LKESIRYLKLRLGDPSSRVVILALTLTESIVKNCGGLVHQEIATEQFMGEMEALYRTHANKRGRDSMEIASRVLDMIQAWGEAFLPFR 89          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A329S7I2_9STRA (VHS domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S7I2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.340e-17
Identity = 43/88 (48.86%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L E +R L+ RLG    +V+ ++LTL E++VKNCG  V +E+A+E+FM  M  + RT++ K  R S+ IA + LD++QAWGEAFLP R
Sbjct:   82 LKESIRYLKLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEQFMGEMETLYRTHANKRGRESMEIASRVLDMVQAWGEAFLPFR 169          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: A0A3M6VSQ9_9STRA (VHS domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSQ9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-17
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L E VR LR RLG    +V+ ++LTL E++VKNCG  V +E+ASE FM  M  + R ++ K  R S+ IA + LD+IQAWGEAFLP R
Sbjct:   11 LKESVRYLRLRLGDPSSRVVVLALTLTESIVKNCGDLVHQEIASESFMNEMEALYRIHANKRGRTSMEIASRVLDMIQAWGEAFLPFR 98          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: G5AI13_PHYSP (VHS domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AI13_PHYSP)

HSP 1 Score: 85.5 bits (210), Expect = 1.800e-17
Identity = 43/88 (48.86%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L E +R L+ RLG    +V+ ++LTL E++VKNCG  V +E+A+E FM+ M  + RT++ K  R S+ IA + LD++QAWGEAFLP R
Sbjct:   82 LKESIRYLKLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEPFMSEMEALYRTHASKRGRDSMEIASRVLDMVQAWGEAFLPYR 169          
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Match: H3H7R0_PHYRM (VHS domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7R0_PHYRM)

HSP 1 Score: 85.1 bits (209), Expect = 2.460e-17
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    4 LSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERFMAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR 91
            L E +R L+ RLG    +V+ ++LTL E++VKNCG  V +EVA+E FM  M  + RT++ K  R S+ IA + LD++QAWGEAFLP R
Sbjct:   83 LKESIRYLKLRLGDPSTRVVILALTLTESIVKNCGDLVHQEVATEPFMGEMEALYRTHANKRGRESMEIASRVLDMVQAWGEAFLPFR 170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132754.2343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7V5_9PHAE1.100e-3275.00VHS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2CD66_9STRA4.510e-2251.69Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4D9CTC8_9STRA3.040e-2152.38VHS domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A835YSD0_9STRA9.400e-2050.00VHS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A0P1AM73_PLAHL8.030e-1951.14VHS domain-containing protein n=1 Tax=Plasmopara h... [more]
W2PST9_PHYPN6.770e-1850.00VHS domain-containing protein n=56 Tax=Phytophthor... [more]
A0A329S7I2_9STRA1.340e-1748.86VHS domain-containing protein n=2 Tax=Phytophthora... [more]
A0A3M6VSQ9_9STRA1.790e-1752.27VHS domain-containing protein n=2 Tax=Peronospora ... [more]
G5AI13_PHYSP1.800e-1748.86VHS domain-containing protein n=1 Tax=Phytophthora... [more]
H3H7R0_PHYRM2.460e-1750.00VHS domain-containing protein n=1 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..91
e-value: 3.4E-20
score: 74.2
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 5..87
IPR002014VHS domainPFAMPF00790VHScoord: 6..87
e-value: 2.0E-16
score: 60.1
IPR002014VHS domainPROSITEPS50179VHScoord: 1..91
score: 20.77
NoneNo IPR availablePANTHERPTHR45898FAMILY NOT NAMEDcoord: 4..90
NoneNo IPR availablePANTHERPTHR45898:SF2TARGET OF MYB PROTEIN 1coord: 4..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132754contigH-elongata_contig132754:535..1284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132754.2343.1mRNA_H-elongata_contig132754.2343.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132754 535..1284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132754.2343.1 ID=prot_H-elongata_contig132754.2343.1|Name=mRNA_H-elongata_contig132754.2343.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
PRRLSEVVRVLRKRLGSQEPQVLSVSLTLAETLVKNCGAHVQKEVASERF
MAAMSKIARTYSFKTSRASIAIADQALDIIQAWGEAFLPRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008942ENTH_VHS
IPR002014VHS_dom