prot_H-elongata_contig131378.2265.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131378.2265.1
Unique Nameprot_H-elongata_contig131378.2265.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: D8LT28_ECTSI (RING-Gid-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.680e-58
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSKFKCPTCPMEQTESDTLALTL 109
            +AG+LALPTLVKMAAVVRGSNQEW GMQELPLEVPLPPGLRYHSMFSCPVSRE ST  NPPVLLKCGH VLRSSVSRL RNGS+FKCPTCP+EQ E++T+ LTL
Sbjct:  150 RAGILALPTLVKMAAVVRGSNQEWNGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHVVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 253          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A6H5K8M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 5.870e-55
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSKFKCPTCPMEQTESDTLALTL 109
            +AG+LALPTLVKMAAVVRGSN EW GM+ELPLEVPLPPGLRYHSMFSCPVSRE ST  NPPVLLKCGHAVLRSSVSRL RNGS+FKCPTCP+EQ E++T+ LTL
Sbjct:  376 RAGILALPTLVKMAAVVRGSNLEWNGMRELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 479          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A484E8Z1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8Z1_BRELC)

HSP 1 Score: 125 bits (315), Expect = 3.300e-32
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
            + GV ALP + K+A+V+     +W  ++ELP+E+P+    R+HS+FSCPVS+E STP NPPVLLKCGH +  S V R+  N S+ FKCPTCP+EQTESDT  L
Sbjct:  315 RVGVPALPAMRKLASVMDSKLADWNNLEELPVEIPIAKEFRFHSVFSCPVSKEESTPENPPVLLKCGHVICHSCVKRISYNLSRQFKCPTCPVEQTESDTCKL 417          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A2P4Y823_9STRA (RMD5 family protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y823_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.620e-32
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
             AGV ALP + K+ AV+     +W  M+ELP+E+P+   LR+H++FSCPVS+E STP NPP+LLKCGH + RS V R   N ++ FKCPTCP+EQTES+T  L
Sbjct:  340 SAGVSALPAMRKLIAVMDSKLADWASMEELPVEIPIAKELRFHNVFSCPVSKEESTPENPPILLKCGHVICRSCVKRFSYNMTRRFKCPTCPIEQTESETRKL 442          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A261Y3R7_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y3R7_9FUNG)

HSP 1 Score: 123 bits (308), Expect = 1.130e-31
Identity = 51/104 (49.04%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLG----RNGSKFKCPTCPMEQTESDTL 105
              G +ALPT++KMA +++    EW    ELP+E+PLP  LRYHS+F+CPVS+E +T  NPP+++ CGH + + S+S+LG    RN SKFKCP CP E T +  +
Sbjct:  242 MVGTIALPTIIKMATIMKDKKTEWSQQDELPVEIPLPENLRYHSIFACPVSKEQATEENPPMMMPCGHVICKESLSKLGKGSRRNSSKFKCPYCPSESTPNQAV 345          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: G4Z294_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z294_PHYSP)

HSP 1 Score: 124 bits (310), Expect = 2.610e-31
Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
             AGV ALP + K+ +V+     +W  M+ELP+E+P+   LR+H++FSCPVS+E STP NPP+LLKCGH + RS V R   N ++ FKCPTCP+EQ ES+T  L
Sbjct:  346 SAGVSALPAMRKLVSVIDSKLTDWGSMEELPVEIPIAKELRFHNVFSCPVSKEESTPDNPPILLKCGHVICRSCVKRFSYNMTRRFKCPTCPVEQAESETRKL 448          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A0P1AZT3_PLAHL (Rmd5 family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZT3_PLAHL)

HSP 1 Score: 123 bits (308), Expect = 4.770e-31
Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
              GV ALP + K+ ++      +W+ M+ELP+E+P+P   R+H++FSCPVS+E STP NPP+LLKCGH +  S V R   N ++ FKCPTCP+EQTE +TL L
Sbjct:  341 STGVSALPAMQKLVSLTDSKLIDWDRMEELPVEIPIPQEFRFHNVFSCPVSKEESTPNNPPILLKCGHVICHSCVKRFSYNMTRRFKCPTCPIEQTEEETLKL 443          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A2D4CM94_PYTIN (RMD5 family protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CM94_PYTIN)

HSP 1 Score: 122 bits (305), Expect = 8.920e-31
Identity = 53/103 (51.46%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
             AG+ ALP + K+ AV+      W+ ++ELP+E+P+P   RYH++F+CPVS+E STP NPP+LLKCGH + +S V R+  N ++ FKCPTCP+EQTE +T  L
Sbjct:  312 SAGIAALPAMRKLVAVMDTKVTNWDTLEELPVELPIPDEHRYHTVFACPVSKEESTPSNPPILLKCGHVICKSCVKRISFNMTRRFKCPTCPVEQTECETREL 414          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: D0NTQ2_PHYIT (RMD5 family protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NTQ2_PHYIT)

HSP 1 Score: 122 bits (306), Expect = 9.480e-31
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
             AGV ALP + K+ +V+     +W  M ELP+E+P+   LR+H++FSCPVS+E STP NPP+LLKCGH +  S V R   N ++ FKCPTCP+EQTES+T  L
Sbjct:  343 SAGVSALPAMRKLVSVMSSKLADWGNMDELPVEIPIAKELRFHNVFSCPVSKEESTPENPPILLKCGHVICHSCVKRFSYNMTRRFKCPTCPVEQTESETRKL 445          
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Match: A0A8K1CKT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKT8_PYTOL)

HSP 1 Score: 119 bits (299), Expect = 7.390e-30
Identity = 51/103 (49.51%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    6 QAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSMFSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSK-FKCPTCPMEQTESDTLAL 107
              G+ ALP + K+ AV+     +WE ++ELP+E+P+    R+H++F+CPVS+E STP NPP+LLKCGH + +S V ++  N ++ FKCPTCPMEQTE++T  L
Sbjct:  321 SVGIAALPAMRKLVAVMDSKMTDWEALEELPVELPIANEHRFHTVFACPVSKEESTPSNPPMLLKCGHVICKSCVKKISFNMTRRFKCPTCPMEQTEAETREL 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131378.2265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT28_ECTSI1.680e-5885.58RING-Gid-type domain-containing protein n=1 Tax=Ec... [more]
A0A6H5K8M5_9PHAE5.870e-5584.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A484E8Z1_BRELC3.300e-3255.34Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A2P4Y823_9STRA4.620e-3255.34RMD5 family protein n=3 Tax=Phytophthora TaxID=478... [more]
A0A261Y3R7_9FUNG1.130e-3149.04Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
G4Z294_PHYSP2.610e-3153.40Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A0P1AZT3_PLAHL4.770e-3151.46Rmd5 family protein n=1 Tax=Plasmopara halstedii T... [more]
A0A2D4CM94_PYTIN8.920e-3151.46RMD5 family protein n=1 Tax=Pythium insidiosum Tax... [more]
D0NTQ2_PHYIT9.480e-3153.40RMD5 family protein n=2 Tax=Phytophthora infestans... [more]
A0A8K1CKT8_PYTOL7.390e-3049.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 46..108
e-value: 2.2E-6
score: 28.7
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 53..93
e-value: 6.3E-6
score: 26.1
NoneNo IPR availablePANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 1..107
NoneNo IPR availablePROSITEPS51867ZF_RING_GIDcoord: 53..95
score: 9.779
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 48..103
IPR027711Rmd5PANTHERPTHR12170:SF3SPORULATION PROTEIN RMD5coord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131378contigH-elongata_contig131378:110..1172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131378.2265.1mRNA_H-elongata_contig131378.2265.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131378 110..1172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131378.2265.1 ID=prot_H-elongata_contig131378.2265.1|Name=mRNA_H-elongata_contig131378.2265.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
LTIIPQAGVLALPTLVKMAAVVRGSNQEWEGMQELPLEVPLPPGLRYHSM
FSCPVSRESSTPGNPPVLLKCGHAVLRSSVSRLGRNGSKFKCPTCPMEQT
ESDTLALTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR027711Rmd5