prot_H-elongata_contig1309.2236.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1309.2236.1
Unique Nameprot_H-elongata_contig1309.2236.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length231
Homology
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 6.990e-82
Identity = 119/210 (56.67%), Postives = 156/210 (74.29%), Query Frame = 0
Query:    8 ELNFAIHVRLGDRATFLNGFETGYVHHIATFIETVTAAVTRQGLDVPMFHIFSETLMPCPDVQSRTFPEFPNWPVEKYQIEPCLDPVTPVDCAEKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLMGCSTFGQISGVLNKGLKFFSFECAGAKTPNHYKMMPPLAVAEQGNLWVPMAGSWHDPSILSEAIFEVALD 217
            +L+ AIHVRLGDR   LN  +  Y  ++  F+ETV +A   +G D P+FHIFSET   CP  ++  F EFP WPVE  Q+  C++  TP +C EK AGA SCNP RSGIF V G+ + LHVGLDVQNDL+CM+ A+GVLMGCSTFGQ++GVL+KG++FFS ECAG +T   YK++PP+A+A +G++WVP++GSWHDP I SE+I   +LD
Sbjct:   76 KLDIAIHVRLGDRKDSLN--DDSYFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAGAPSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLD 283          
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 2.360e-76
Identity = 111/207 (53.62%), Postives = 144/207 (69.57%), Query Frame = 0
Query:   17 LGDRATFLNGFETGYVHHIATFIETVTAAVTRQGLDVPMFHIFSETLMPCPDVQSRTFPEFPNWPVEKYQIEPCLDPVTPVDCAEKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLMGCSTFGQISGVLNKGLKFFSFECAGAKTPNHYKMMPPLAVAEQGNLWVPMAGSWHDPSILSEAIFEVALDNHLKNK 223
            +GDR  F +G    Y H++   +ETV      +GL  P+FH+FSETL PCP   +  F EFP WPVE  +IE CL   TP+DC EK+AG   C P+R+GIFR+  K + LHVG DVQN+++CM QADGVLMGCSTFGQI+G+L +G+  FS  C+G  TP+ Y+ +PPLA+AE+G+LWVP+ GSWHDP + S +IF  ALD  L  K
Sbjct:    1 MGDRRAFYDG-SLQYFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGTF-CTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALDTLLVAK 205          
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.020e-59
Identity = 105/224 (46.88%), Postives = 135/224 (60.27%), Query Frame = 0
Query:    8 ELNFAIHVRLGDRATFLNGFETGYVHHIATFIETVTAAVTRQGLDVPMFHIFSETLMPCPDVQSRTFPEFPNWPVEKYQIEPCLD-------PVTPVDCAEKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLMGCSTFGQISGVLNKG-LKFFSFECAGAKTPNHYKMMPPLAVAEQGNLWVPMAGSWHDPSILSEAIFEVALDNHLKNK 223
            +LNFA+HVR+GDR   L G    Y   +  F+ TVT AV  +    PMFH+FSE L PCP  ++ TF EFP WPVE+ Q++  +            V    + A        R G FRV G+P+ LH+G +    L+CM  ADG+LMGCSTFGQ++GVLN   + FFS EC G   P   KM+PPLAVAE+G +WVP+AGSW DP + ++ IF  ALD  LK K
Sbjct:   26 QLNFALHVRMGDRRE-LEGVTPEYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCLRNAAEQGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALLKRK 248          
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 2.480e-56
Identity = 108/221 (48.87%), Postives = 139/221 (62.90%), Query Frame = 0
Query:    8 ELNFAIHVRLGDRATFLNGFETGYVHHIATFIETVTAAVTRQGLDVPMFHIFSETLMPCPDVQSRTFPEFPNWPVEKYQIEPCLDPVTPVDCAEKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLMGCSTFGQISGVLN-KGLKFFSFECAGAKTPNHYKMMPPLAVAEQGNLWVPMAGSWHDPSILSEAIFEVALDNHLKNKRVSS 227
            ELNFA+HVR+GDR   L G    Y   +  F+ TVT AV  +    PMFH+FSE L PCP  ++ TF EFP WPVE+ Q+  C     P + AE+   A      R   FRV G+P+ LH+G +    L+CM  ADG+LMGCSTFGQ++GVLN  G+ FFS EC G   P   KM+PPLAVAE+G +WVP+AGSW DP + ++ +F   LD  LK K+ S+
Sbjct:  184 ELNFALHVRMGDRRE-LEGVTPEYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVC-----PRNAAEQDGPA-----SRPDTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELLKRKQGST 393          
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Match: A0A6H5JXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM8_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.000e-50
Identity = 82/185 (44.32%), Postives = 112/185 (60.54%), Query Frame = 0
Query:   39 IETVTAAVTRQGLDVPMFHIFSETLMPCPDVQSRTFPEFPNWPVEKYQIEPCLDPVTPVDCAEKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLMGCSTFGQISGVLNKGLKFFSFECAGAKTPNHYKMMPPLAVAEQGNLWVPMAGSWHDPSILSEAIFEVALDNHLKNK 223
            ++ +   V   G   P+FHIFSET +PCP ++   FPEFP W V   +I  C     P DC EK+AG   C P  +GIFRV G+P+  +VG +V   L  M  AD V+MGCS FGQ++G+L+KG+K FS  C G  T    KM P  A+AE G LWVP+ GSW DP++ +  IF  A + +++ +
Sbjct:    1 MKVIAKEVHGLGQRTPLFHIFSETELPCPSLEDGVFPEFPEWAVAPDEIRECHSARPPDDCPEKQAGGDFCYPHHTGIFRVPGEPIIFNVGGNVVQSLMSMISADAVVMGCSAFGQLAGILSKGIKLFSTGCEGNMTWEQNKMAPLFAIAELGELWVPLEGSWADPTLTNVGIFRKAFELYVERE 185          
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Match: A0A6H5JJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ94_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 8.120e-14
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   86 QIEPCLDPVTPVDCAEKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLM 147
            QIE CL   TP DC EK+AG   C P+R+GIFR+  K + LH+G DVQN+++C+ +ADGVLM
Sbjct:   21 QIEECLAATTPQDCPEKQAGTF-CTPKRAGIFRIRYKSIVLHMGSDVQNEMSCIIEADGVLM 81          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1309.2236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JW68_9PHAE6.990e-8256.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J8_ECTSI2.360e-7653.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L814_9PHAE1.020e-5946.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT1_ECTSI2.480e-5648.87Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5JXM8_9PHAE2.000e-5044.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ94_9PHAE8.120e-1456.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1309contigH-elongata_contig1309:15381..16235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1309.2236.1mRNA_H-elongata_contig1309.2236.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1309 14829..16858 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1309.2236.1 ID=prot_H-elongata_contig1309.2236.1|Name=mRNA_H-elongata_contig1309.2236.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp
MYSSAPDELNFAIHVRLGDRATFLNGFETGYVHHIATFIETVTAAVTRQG
LDVPMFHIFSETLMPCPDVQSRTFPEFPNWPVEKYQIEPCLDPVTPVDCA
EKRAGALSCNPERSGIFRVFGKPLYLHVGLDVQNDLTCMSQADGVLMGCS
TFGQISGVLNKGLKFFSFECAGAKTPNHYKMMPPLAVAEQGNLWVPMAGS
WHDPSILSEAIFEVALDNHLKNKRVSSNKE*
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