prot_H-elongata_contig1302.2202.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: D7FQT7_ECTSI (RNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQT7_ECTSI) HSP 1 Score: 337 bits (864), Expect = 5.360e-109 Identity = 265/420 (63.10%), Postives = 280/420 (66.67%), Query Frame = 0
Query: 1 MLKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHN-RGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRDGPRPSSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSGY---GGGGYNQGGDRSQQSYGGYSGQQQGYXXXXXXXXXXXXGXXXXQQDQGYATSGYSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQQQGYSSTGQAASXXXXXXX-------------TDTTGNGSYGASTAAASXXXXXXXXXXXXXAYRGGATTQSRQDRSYRPY 403
MLKTHFGKWG+L+DVILMRNKITGEPRGFGFVQFQ ++SADAALKEEHVIDGRTIDVKRAVPRDRAP PRA DR N RGGSQ+G R GGMNDAPLTNKIFVGGLDQEVND+DFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYD+PD+VRKVM GG HELKGKSVEVKTAAPRDGPR +GGGG XXXXXXXXXXXXXX XXXXXXXXXX XXXXX GGGYNQ QQ GGY XXX XXX QQDQ YA+ XXXXXXXXX G Q GYS XXXXXXX TD +G+G YG +T AA+ AYRGGATTQ RQ+RSYRPY
Sbjct: 76 MLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSANARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGGFXXXXXXXXXXXXXXYXXXXXXXXXXQQGWSQQGXXXXXXXXXXQQXXGGGYNQ-----QQQQGGYG---------------XXXXXXXGQQDQSYASX------------XXXXXXXXXQGAATTPRQSSQTASTGYNQGTTAQQGYGAQTGYSXXXXXXXXXXXXXXXXXXXXYGTSYAGTDASGSGGYG-NTGAATGYGTAGVDQGGYGAYRGGATTQGRQERSYRPY 462
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: A0A835M6Y2_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M6Y2_9MAGN) HSP 1 Score: 178 bits (451), Expect = 2.150e-48 Identity = 89/178 (50.00%), Postives = 116/178 (65.17%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRG-GSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRD 178
L+ HF K+G + D ++MR+++T PRGFGFV F S D AL+E HVI RT++VK+AVPR Q ++++ H+RG G + S GG N + KIFVGGL V + +FRGYF KFG++ D VVMYD T R RGFGFIT+D+ + V VM HEL KSVEVK A P+D
Sbjct: 24 LRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVVDQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKSSSNAGGNNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQNNFHELNNKSVEVKRAVPKD 201
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: A0A835ZAL5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL5_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.110e-45 Identity = 94/188 (50.00%), Postives = 120/188 (63.83%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKE-EHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRDGPRPSSGGGG 188
L HF K+G+L+DV LM++K TG+PRGFGF++F+ S DA L + EH IDGR +DVKRAVP+ AP P T RQ N K+FVGGL V ++FR YF FG V DAVVM+D++T RSRGFGF+T+ + VV+ V+ G HEL GK VEVKTA P++ R +S GGG
Sbjct: 34 LSYHFSKFGALADVALMKDKYTGQPRGFGFIKFEDPSVLDAVLAQPEHNIDGRVVDVKRAVPKSEAPGPARAT--------------RQADFN------KVFVGGLAPSVTAAEFRQYFEGFGAVSDAVVMFDRQTQRSRGFGFVTFQDESVVQNVLM-GTHELNGKMVEVKTAEPKESRRNASPGGG 200
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: A0A5A7PXB6_STRAF (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PXB6_STRAF) HSP 1 Score: 168 bits (426), Expect = 8.540e-45 Identity = 89/190 (46.84%), Postives = 122/190 (64.21%), Query Frame = 0
Query: 1 MLKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQ--MGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRDGPRPSSGGGG 188
+L HF K+G +S ++ +++++G+PRGF FV F +S+ D AL+E H I GRT++VKRA+PR + +Q ++RG S+ G+ +G D T KIFVGGL + + +FR YFAKFG++ D VVM+D T R RGFGFITYD+ D V +VM HEL GK VEVK A P+DG S G G
Sbjct: 22 ILNEHFNKYGVVSGSVIAKDRVSGQPRGFAFVTFSESSAVDRALQESHQILGRTVEVKRAIPRSEQQ-----SQQQHNSRGLSRNFSGTNKGRNTDEFRTKKIFVGGLSTNLTEQEFRSYFAKFGRITDVVVMHDNMTHRPRGFGFITYDSEDSVEEVMQKNFHELAGKLVEVKRAVPKDGSNSSGNGYG 206
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: UPI001C50233F (heterogeneous nuclear ribonucleoprotein 1-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C50233F) HSP 1 Score: 167 bits (424), Expect = 1.020e-44 Identity = 90/178 (50.56%), Postives = 115/178 (64.61%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRDG 179
LK HFGK+G + + ++MR+K TG RGFGFV F S AD AL+++HVI GRT++VK+AVPR Q + Q N+G S S GG ++ T KIFVGGL + + +F+ YF KFG+V D VVMYD T R RGFGFIT+D+ + V VM HEL K VEVK A P+DG
Sbjct: 22 LKDHFGKYGDVVESVIMRDKNTGSARGFGFVLFSDPSVADKALQDKHVILGRTVEVKKAVPR--GDQHQHXXXXQQQNKG-SIKNSSNGGSDNQFRTKKIFVGGLSSSLTEEEFKSYFEKFGRVTDVVVMYDSVTHRPRGFGFITFDSEEAVESVMQKNFHELNDKFVEVKRAVPKDG 196
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: I1I4K8_BRADI (Uncharacterized protein n=18 Tax=Pooideae TaxID=147368 RepID=I1I4K8_BRADI) HSP 1 Score: 169 bits (429), Expect = 1.440e-44 Identity = 91/187 (48.66%), Postives = 114/187 (60.96%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRDGPRPSSGGGG 188
L HF +G +S +MR+K+TG PRGFGFV + ++ DAAL E H +DGRT+DVKRA+ R+ +A N GG + G T KIFVGGL + D +FR YF FG V D VVMYD+ T R RGFGFIT+D+ D V +V+H H+L GK VEVK A PR+ P SGGGG
Sbjct: 22 LHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLEPHTLDGRTVDVKRALSREEQQASKAVNPSTGRNTGGXXXXNDASGTR----TKKIFVGGLPSSLTDDEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRALPREA-NPGSGGGG 203
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: S8D8L2_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D8L2_9LAMI) HSP 1 Score: 166 bits (419), Expect = 3.210e-44 Identity = 87/183 (47.54%), Postives = 116/183 (63.39%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRD-GPRPS 183
LK +FG +G + + ++MR++ TG RGFGF+ F + A+ +KE+H+IDGRT++ K+AVPRD D L NR GS G + + T KIFVGGL V ++DF+ YF +FG + D VVMYD T R RGFGFITYD+ D V +V+H HEL GK VEVK A P++ P PS
Sbjct: 28 LKEYFGAYGEVIEAVIMRDRATGRARGFGFIVFANPLVAERVVKEKHIIDGRTVEAKKAVPRD---------DHHLMNRNTGSGGSIHGSPSQS-RTKKIFVGGLASTVTENDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHNTFHELNGKMVEVKRAVPKELSPGPS 200
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: A0A2R6RN95_ACTCC (RNA-binding protein n=4 Tax=Actinidia TaxID=3624 RepID=A0A2R6RN95_ACTCC) HSP 1 Score: 165 bits (418), Expect = 1.060e-43 Identity = 85/179 (47.49%), Postives = 116/179 (64.80%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRG-GSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRDG 179
L+ HFGK+G++ D ++ R++ TG RGFGFV F +S+ + AL++ HVI RT++VK+A+PR+ Q Q N+G +GS GG D T KIFVGGL + + +F+ YF KFG++ D VVMYD T R RGFGFIT+D+ D V +VM HEL GK VEVK A P++G
Sbjct: 23 LRNHFGKYGAVVDSVIARDRTTGSHRGFGFVSFSDSSAVEKALQDSHVILERTVEVKKAIPRNEQHQ------NQQQNKGLNRNIGSSSGGSADQFRTKKIFVGGLAPILTEEEFKSYFEKFGRITDVVVMYDNVTSRPRGFGFITFDSEDAVEEVMKKSFHELTGKLVEVKRAVPKEG 195
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: A0A7S3UWI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWI8_HETAK) HSP 1 Score: 160 bits (405), Expect = 1.400e-43 Identity = 82/177 (46.33%), Postives = 111/177 (62.71%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRD 178
LK +F K+G L D +M++K TG+PRGFGFVQF+ AS+ D L EEH IDGR +D+K+A+ R+ AP+ +++ KIFVGGL+Q V + DF+ YF KFG + DAVVM D+ T RSRGFGF+TY + + V +VM+ H L+ K VE+K A PRD
Sbjct: 30 LKFYFEKFGKLKDCAVMKDKFTGQPRGFGFVQFEDASAVDKVLAEEHTIDGRVLDIKKAISREHAPRA----------------------ISEKIDVKKIFVGGLEQAVTEGDFKDYFGKFGDITDAVVMMDRNTNRSRGFGFVTYADAESVNRVMN-ETHTLRDKVVEIKRAEPRD 183
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Match: A0A830BZA9_9LAMI (Heterogeneous nuclear ribonucleoprotein 1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BZA9_9LAMI) HSP 1 Score: 167 bits (424), Expect = 1.440e-43 Identity = 90/185 (48.65%), Postives = 116/185 (62.70%), Query Frame = 0
Query: 2 LKTHFGKWGSLSDVILMRNKITGEPRGFGFVQFQHASSADAALKEEHVIDGRTIDVKRAVPRDRAPQPRATTDRQLHNRGGSQMGSRQGGMNDAPLTNKIFVGGLDQEVNDSDFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDNPDVVRKVMHGGVHELKGKSVEVKTAAPRD-GPRPSSG 185
LK +FG +G + + ++MR++ TG RGFGFV F + + A+ +KE+HVIDGRT++ K+AVPRD D+ L NR S QG T KIFVGGL V ++DF+ YF +FG + D VVMYD T R RGFGFITYD+ D V V+H HEL GK VEVK A P++ P PS G
Sbjct: 22 LKAYFGAYGEVVEAVIMRDRTTGRARGFGFVVFSNPADAERVVKEKHVIDGRTVEAKKAVPRD---------DQHLINRNSGSSSSIQGSPGPG-RTKKIFVGGLASTVTENDFKTYFDQFGTIMDVVVMYDHNTQRPRGFGFITYDSEDAVDMVLHKTFHELNGKMVEVKRAVPKELSPGPSRG 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1302.2202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig1302.2202.1 ID=prot_H-elongata_contig1302.2202.1|Name=mRNA_H-elongata_contig1302.2202.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bpback to top |