prot_H-elongata_contig128815.2121.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128815.2121.1
Unique Nameprot_H-elongata_contig128815.2121.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A6H5JVM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVM9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.740e-18
Identity = 46/108 (42.59%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            IR+RW ++F  LLN KS  +D     ++ + P    L   P+  E+  A++ M   KAVGLD LPA L+KL L  D+ +LR  H      W+ G  PQQWKDA I VL
Sbjct:   74 IRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGLDDLPAELIKLFLDGDQGLLRAFHATVVDAWQTGDAPQQWKDATIKVL 181          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A6H5JL41_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL41_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 6.590e-17
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASA---LGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRE-LHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW +FF  LLN KS  L+PDI  ++ Q P   A   LG  P  EE+  A + ++  KA G DSLPA LLK++   + +I+ E L  +    W  G+IPQ+WKD  I VL
Sbjct:   39 ILQRWARFFGTLLNTKSPTLNPDIIEQVMQRPATCAIRRLGAVPDPEEVERATKGLQNWKAPGNDSLPAELLKIDDDDEESIVMEDLRAIFVKTWNGGEIPQEWKDTTIKVL 150          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A6H5JCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG6_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.180e-16
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVA---SALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW +FF  L N KS  L+PDI  R+ Q P       LG  P  EE+  A + ++  KA+G DSLPA LLK++   +  +L  LH +   +W  G IP++WKDA I VL
Sbjct:  265 ILQRWARFFSTLFNTKSPTLNPDIIERVTQRPATRDTQRLGDVPELEEVARATKGLKNWKALGHDSLPAELLKID-DDEPFVLGHLHTILVKVWNGGDIPREWKDATIKVL 374          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A6H5KDR6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.310e-14
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW ++F  LL+ KS  +D     ++ + P    L   P+  E+  AM+ M   KAVG D LPA  +KL L  D+ +LRE+      +W+ G  PQQWKDA I VL
Sbjct:   74 IHQRWARWFHKLLSTKSPTIDLHAADKIKRWPTCVPLDDIPSLLEVEKAMREMANRKAVGPDDLPAERIKLFLDGDQGLLREVSATVVDVWQTGDKPQQWKDATIEVL 181          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A2B4S1X4_STYPI (LINE-1 retrotransposable element ORF2 protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S1X4_STYPI)

HSP 1 Score: 65.5 bits (158), Expect = 3.170e-10
Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 0
Query:    3 ERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            ERWV+ +  L + K   +D  +   +PQ P  + L I PTEEE+  A++ + + KA G D++PA ++K   +    +L  LH+L    W E +IPQ  +DA IT+L
Sbjct:   41 ERWVERYSNLYS-KERHVDGQLREIIPQLPEMTELDIPPTEEELAIAIEELASRKAPGNDNIPAEVVK---ENKAFLLPYLHKLLMTCWLEAEIPQDMRDAKITIL 142          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A7M3RRA7_SPIER (Hypothetical protein n=2 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RRA7_SPIER)

HSP 1 Score: 63.9 bits (154), Expect = 1.300e-9
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW + FR +LN  S + D  I  RLPQ    + L ++P+ +E N A+Q + + KA G D++PA + K        ++  L  L   +WR+G++PQ +KDA I  L
Sbjct:  195 ILQRWAEHFRGVLNRPSVISDAAI-ERLPQVETNADLDLQPSLQETNRAVQQLSSGKAPGSDAIPAEVYK---HGGPQLMDHLTALFQEMWRQGEVPQDFKDATIVHL 298          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A7M3QSN1_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QSN1_SPIER)

HSP 1 Score: 61.2 bits (147), Expect = 2.490e-9
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW + FR +LN  S + D  I  RLPQ      L + P+ +E   A+Q + + KA G D++PA + K    +   ++ +L  L   +WR+G++PQ +KDA I  L
Sbjct:   26 ILQRWAEHFRGVLNRPSVISDAAI-ARLPQVETNVDLNLPPSLQETIRAVQQLSSGKAPGSDAIPAEVYK---HEGPELMDQLTALFQEMWRQGEVPQDFKDATIVHL 129          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A7M3PV79_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3PV79_SPIER)

HSP 1 Score: 63.2 bits (152), Expect = 2.530e-9
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW + FR +LN+ S + D  I  RLPQ    + L + P+ +E   A+Q + + KA G D++PA + K        ++  L  L  V+WR+G++PQ +KDA I  L
Sbjct:  535 ILQRWAEHFRGVLNSPSAISDAAI-ARLPQVETNADLDLPPSLQETIRAVQQLSSGKAPGSDAIPAEVYK---HGGPQLMDHLTALFQVMWRQGEVPQDFKDATIVHL 638          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A654HFV3_9CEST (Reverse transcriptase domain-containing protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HFV3_9CEST)

HSP 1 Score: 62.8 bits (151), Expect = 3.300e-9
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW + FR +LN  S + D  I  RLPQ      LG+ P+ +E+  A+Q +   KA G D++PA + K        ++  L  L   +WR+G++PQ +KDA I  L
Sbjct:  230 ILQRWAEHFRGVLNRPSTISDAAI-ARLPQVETNVDLGLPPSLQEVIRAVQQLSRGKAPGSDAIPAEVYK---HGGPQLMDHLTALFQEMWRQGEVPQDFKDATIVHL 333          
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Match: A0A7M3QAT3_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QAT3_SPIER)

HSP 1 Score: 62.4 bits (150), Expect = 4.170e-9
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAMQAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQWKDAVITVL 108
            I +RW + FR +LN  S + D  I  RLPQ    + L + P+ +E   A+Q + + KA+G D++PA + K        ++  L  L   +WR+GK+PQ +KDA I  L
Sbjct:   58 ILQRWAEHFRGVLNRPSVISDAAI-ARLPQVATNADLDLPPSLQETIRAVQQLSSGKALGSDAIPAEVYK---HGGPLLMDHLTALFQEMWRQGKVPQDFKDATIVHL 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128815.2121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVM9_9PHAE6.740e-1842.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL41_9PHAE6.590e-1742.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCG6_9PHAE1.180e-1642.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDR6_9PHAE1.310e-1439.81Reverse transcriptase domain-containing protein n=... [more]
A0A2B4S1X4_STYPI3.170e-1036.79LINE-1 retrotransposable element ORF2 protein n=1 ... [more]
A0A7M3RRA7_SPIER1.300e-936.11Hypothetical protein n=2 Tax=Spirometra erinaceieu... [more]
A0A7M3QSN1_SPIER2.490e-935.19Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A7M3PV79_SPIER2.530e-936.11Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A654HFV3_9CEST3.300e-936.11Reverse transcriptase domain-containing protein n=... [more]
A0A7M3QAT3_SPIER4.170e-936.11Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128815contigH-elongata_contig128815:477..800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128815.2121.1mRNA_H-elongata_contig128815.2121.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128815 477..800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128815.2121.1 ID=prot_H-elongata_contig128815.2121.1|Name=mRNA_H-elongata_contig128815.2121.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
IRERWVQFFRLLLNAKSDMLDPDIPTRLPQHPVASALGIEPTEEEINTAM
QAMETAKAVGLDSLPAVLLKLELQQDRTILRELHRLTTVIWREGKIPQQW
KDAVITVL
back to top