prot_H-elongata_contig126907.1995.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126907.1995.1
Unique Nameprot_H-elongata_contig126907.1995.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
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BLAST of mRNA_H-elongata_contig126907.1995.1 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 7.060e-13
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0 
Query:    1 QVLEDTGDVATENVDRVKRETSRVAERLRKKRAAACASWCMMFLV 45
            QVLEDTGD AT+NVDRVKRE +RV+ERLRKKRAA  ASWCMM  V
Sbjct:  223 QVLEDTGDAATQNVDRVKRENARVSERLRKKRAAMFASWCMMITV 267
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BLAST of mRNA_H-elongata_contig126907.1995.1 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 4.090e-11
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0 
Query:    1 QVLEDTGDVATENVDRVKRETSRVAERLRKKRAAACASWCMMFLV 45
            QVLEDTGD A +NV RVKRE +RV+ERLRKKRAA  ASWCMM  V
Sbjct:  229 QVLEDTGDAAIQNVGRVKRENARVSERLRKKRAAMFASWCMMITV 273
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126907.1995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHQ2_ECTSI7.060e-1380.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6N4_9PHAE4.090e-1175.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126907contigH-elongata_contig126907:930..1064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126907.1995.1mRNA_H-elongata_contig126907.1995.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126907 930..1064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126907.1995.1 ID=prot_H-elongata_contig126907.1995.1|Name=mRNA_H-elongata_contig126907.1995.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
QVLEDTGDVATENVDRVKRETSRVAERLRKKRAAACASWCMMFLV
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