prot_H-elongata_contig126417.1968.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126417.1968.1
Unique Nameprot_H-elongata_contig126417.1968.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: D8LRJ6_ECTSI (Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ6_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.900e-61
Identity = 102/120 (85.00%), Postives = 111/120 (92.50%), Query Frame = 0
Query:    1 QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDELQILGKELGLLRGLSFHLAVFHPYRALPALLEGARLKARKEGISPPADSLVALHDGARAALDDIVV 120
            QATA+AYF RFYLSNSVLEHDP ILILTCVFLASKTEEQ+TNVNLLAKATG D+LQILGKEL LL+GLSFHLAVFHPYRALPAL+EGARLKA+ EGI P  + ++ALHDGARAALDDIVV
Sbjct:  149 QATAIAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDIVV 268          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A7S3XH57_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XH57_HETAK)

HSP 1 Score: 101 bits (251), Expect = 5.330e-25
Identity = 49/92 (53.26%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    1 QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDELQILGKELGLLRGLSFHLAVFHPYRALPALLEGARLKA 92
            QATA+ +F+RFYL+NS++ +DP I++LTCV+LASK EE+I NV  LA+ATG+ E ++L  E+ +L+GL F L  +HPYRAL A L+   + A
Sbjct:   52 QATAIVFFKRFYLANSIMAYDPKIIMLTCVYLASKIEEEIINVADLAQATGQQEDKVLRAEMPVLQGLRFELRCYHPYRALRAFLDDLAVAA 143          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: D8SKW4_SELML (Uncharacterized protein CYCH-2 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SKW4_SELML)

HSP 1 Score: 81.6 bits (200), Expect = 6.200e-16
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDELQILGKELGLLRGLSFHLAVFHPYRAL 81
            QATAV YF+RFYLS SV+EHDP  ++LTC++++ K EE   +   L K   +D   IL  EL LL+GL+F L V+ PYR+L
Sbjct:   98 QATAVLYFKRFYLSWSVMEHDPKHIMLTCIYISCKVEEFHVSAEELGKGIQQDHQVILKNELTLLQGLNFDLIVYAPYRSL 178          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A7S1GLK0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GLK0_CYCTE)

HSP 1 Score: 79.0 bits (193), Expect = 3.620e-15
Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 0
Query:    2 ATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGR-----DELQILGKELGLLRGLSFHLAVFHPYRALPALLEGARL-----KARKEGISPPADS--------LVALHDGARAALDDIVV 120
            ATA   F+RF+LSNSV+ HDP  +++   FLA+K E+ +T V  L + T        + +IL  E  LL G+   L  FHPY+A+ A  E  R      K R     P  ++        L  +HDGAR  +DD++V
Sbjct:   24 ATAALLFRRFFLSNSVMLHDPKAIMVAAAFLAAKVEDAMTEVRHLEEGTKMMNSPVSQTEILQSEFALLEGIHCDLLCFHPYKAVLAFTEDLRTYIKSDKGRSLAKFPNGETNRLVVGKDLKPMHDGARQMVDDVIV 160          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A7J7Q2Y0_9CHLO (Cyclin-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q2Y0_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 5.090e-15
Identity = 47/124 (37.90%), Postives = 72/124 (58.06%), Query Frame = 0
Query:    4 AVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDELQILGKELGLLRGLSFHLAVFHPYRALPALL-EGARLKARKEGI------SPPADSLVALHDGARAALDDIVV 120
            ++ +F+RFY+ +S LEHDPT ++ TC++L  K EE   +   LAKA G +   +L  E+ LL+GL F L V  PYRAL  L  E   L+++K  +      + P D++      ARAA D +++
Sbjct:   94 SLLFFKRFYVQSSCLEHDPTRVMPTCIYLGCKVEEAYRSAESLAKAMGIEANTVLRYEVPLLQGLKFDLVVHSPYRALAGLFKELDDLRSQKSSLLDAQLLAAPPDAIDKARGRARAAADSLLL 217          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A7S4ARS1_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARS1_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 5.760e-15
Identity = 51/136 (37.50%), Postives = 75/136 (55.15%), Query Frame = 0
Query:    2 ATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDEL-----QILGKELGLLRGLSFHLAVFHPYRALPALLEGAR--LKARK--------EGISPP--ADSLVALHDGARAALDDIVV 120
            ATA    +RFYLSNSV+ HDP  ++++  FLASK E+ +T+V  L + T          +IL  E  LL G++F L  FHPY+A+ A+ E  R  LK+ K         G   P     L  +HD A++ ++D++V
Sbjct:  115 ATAATLLRRFYLSNSVMIHDPKTIMVSAAFLASKVEDAMTDVRYLEEGTNLMNSPVTLSEILPAETKLLSGINFELLCFHPYKAVLAITEDLRTYLKSEKGRSLVKFLNGTDRPIIGQDLKPMHDDAQSIVNDVIV 250          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A7S3H848_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H848_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.400e-15
Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    2 ATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGR-DELQILGKELGLLRGLSFHLAVFHPYRALPALL 85
            AT+VAYF +FY  NS++EHDP +++L+C+FLA K E+   N+  L K   +  E +IL  E+ LL  L+FHL VFHP   + +++
Sbjct:   50 ATSVAYFHQFYEVNSLIEHDPRLVMLSCIFLAGKAEDNFVNLQELFKIYPKFPESRILECEIVLLESLNFHLKVFHPQNCVYSII 134          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A6A5CBA2_NAEFO (CYCLIN domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5CBA2_NAEFO)

HSP 1 Score: 78.2 bits (191), Expect = 1.280e-14
Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 0
Query:    1 QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQ-------ITNVNLLAKATGRDELQILGK-ELGLLRGLSFHLAVFHPYRALPALLEGARLKARKEGISPPADSLVALHDGARAALDDIV 119
            +ATA+ Y +RFYL +S++E+D   ++LTC+FLA+KTEE+       + NVN +    G    Q + K EL LL+GL F+L V+HPYR+L A           +     AD+L   ++GA+  + D++
Sbjct:  107 KATALTYLKRFYLKHSIMEYDIVFMMLTCIFLATKTEEKFVALAQFLENVNAITSGAGTLTSQFIFKNELILLQGLDFNLMVYHPYRSLYAYAHDLH-----DMYGNDADTL---YEGAQQKITDLI 225          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: UPI000901D688 (cyclin-H1-1 isoform X2 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901D688)

HSP 1 Score: 77.0 bits (188), Expect = 2.350e-14
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0
Query:    1 QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDELQILGKELGLLRGLSFHLAVFHPYRALPALLEGARLKARKEGISPPADSLVALHDGARAALD 116
            QATA+ YF+RFYL  SV+EH P  ++LTC+++A K EE   +   L K   +D   IL  EL +L+ L F L VF PYRA+   +         EG     D+L  L + A+   D
Sbjct:  101 QATALIYFKRFYLQWSVMEHHPKNIMLTCIYIACKAEENHVSAEELGKGIEQDHQVILNNELLVLQSLDFDLIVFAPYRAVEGFVNDIEEFRGAEG--EQLDTLKKLLESAKIEAD 214          
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Match: A0A388LB46_CHABU (CYCLIN domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LB46_CHABU)

HSP 1 Score: 77.8 bits (190), Expect = 2.790e-14
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKATGRDELQILGKELGLLRGLSFHLAVFHPYRALPALL 85
            QATA+ YF+RFYLS SV+EHDP  ++LTC++L+ K EE   + +   K   +D   +L  EL +L+GL F L V+ PYR++   L
Sbjct:  228 QATAILYFKRFYLSWSVMEHDPKHIMLTCIYLSCKVEEFHVSADEFGKGIKQDPGVVLKNELTVLQGLGFDLIVYAPYRSVEGFL 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126417.1968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRJ6_ECTSI1.900e-6185.00Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A7S3XH57_HETAK5.330e-2553.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8SKW4_SELML6.200e-1651.85Uncharacterized protein CYCH-2 n=4 Tax=Selaginella... [more]
A0A7S1GLK0_CYCTE3.620e-1536.50Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7J7Q2Y0_9CHLO5.090e-1537.90Cyclin-like protein n=1 Tax=Scenedesmus sp. NREL 4... [more]
A0A7S4ARS1_9STRA5.760e-1537.50Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S3H848_9STRA9.400e-1544.71Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A6A5CBA2_NAEFO1.280e-1437.80CYCLIN domain-containing protein n=1 Tax=Naegleria... [more]
UPI000901D6882.350e-1439.66cyclin-H1-1 isoform X2 n=1 Tax=Ipomoea nil TaxID=3... [more]
A0A388LB46_CHABU2.790e-1445.88CYCLIN domain-containing protein n=1 Tax=Chara bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 2..72
e-value: 5.3E-10
score: 39.1
NoneNo IPR availableGENE3D1.10.472.10coord: 1..95
e-value: 3.3E-24
score: 87.4
NoneNo IPR availablePANTHERPTHR10026:SF8CYCLIN-Hcoord: 1..96
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 1..96
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126417contigH-elongata_contig126417:576..1789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126417.1968.1mRNA_H-elongata_contig126417.1968.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126417 576..1789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126417.1968.1 ID=prot_H-elongata_contig126417.1968.1|Name=mRNA_H-elongata_contig126417.1968.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
QATAVAYFQRFYLSNSVLEHDPTILILTCVFLASKTEEQITNVNLLAKAT
GRDELQILGKELGLLRGLSFHLAVFHPYRALPALLEGARLKARKEGISPP
ADSLVALHDGARAALDDIVVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf