prot_H-elongata_contig12637.1964.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12637.1964.1
Unique Nameprot_H-elongata_contig12637.1964.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length582
Homology
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A6H5LBB4_9PHAE (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBB4_9PHAE)

HSP 1 Score: 603 bits (1554), Expect = 6.030e-208
Identity = 322/529 (60.87%), Postives = 389/529 (73.53%), Query Frame = 0
Query:   27 LLLLPSAAFIGAGRFLPHSDCQEHLVTLGQARAATTGLNELRVLYVSCSWSNHGRGE-RDWDARDFKTTRDFLQRNPNLVFVYVGRSCMVSDSDNS--LRASQLRHVPCALMRADCMLILPPHSGNLAWEADSPMIKCQHHSDLRSHALGSWARMELALAAMGQAKVYVAFRAVPYPESVFELEPGKSNVRDIVKKAVDTLKNDAGPSGAGEANAMTGNVSFEIDVTAKVGAQGNGVDNKLMASTAAVME-ACENWLSADLNPLKALEEARVVVTVAEKHGNVKVLESVRRMHPISPSDKLIVGVRAALGEEHIKGSGELALCLLLFSVLCSRPKERGTYTDAFVDAAAKMEITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEELGSNHEGQGDFLSKFSVGAALVHT 551
            LLLLP   FI AGRF+P+++C++ LV+LGQARAAT G+ +LRVLYVSCSW++ G GE   W  +DF+TTR +LQRNP+L FVYVGRSC+V  S ++  +R++QLRHV  AL+R+D +L+LP  + +   E  S     ++ +D    A GS +RM LA+AA+GQAKV+VAFRA  YPESV ELE GKSNVR   K+AVD L+  A                                  +   STAAV+E ACENWL ADLNPL ALE+AR VV  A++  + + LE+++ M P +PS       RAALG+E I    ELAL +LLF+VLCS+ KER TYT+ FV+   KMEI+Y P+A++RSPYRERFGTPRQPQVTASVL G AQEGQI+FL+G GYEEALQDL GFDMIWVL+HMHLN+GWN KVRPPRLPEERKGLFSTRSPHRPN +ALSSLRV RVD + GVIYVHGLDLLDGTPVLDIKPYIGYCDAFP+ + GWL+ LGS+HE QGDFL KFSVGA LVHT
Sbjct:  123 LLLLPRECFIVAGRFVPYAECRDQLVSLGQARAATAGVEQLRVLYVSCSWASAGGGEGTGWAVQDFETTRAYLQRNPDLSFVYVGRSCVVGSSSSTGHVRSTQLRHVAPALLRSDAVLVLPRLAKSPGGEEGSGSTGTRY-TDFECSARGSRSRMVLAIAAVGQAKVFVAFRAGSYPESVVELELGKSNVRATAKQAVDALRAAAA--------------------------------KRPQKSTAAVVEEACENWLGADLNPLSALEQARAVVEEAQRSDDGEALENIQSMRP-APS--FAANARAALGDEFIGEERELALSMLLFAVLCSQRKERATYTENFVEDVGKMEISYCPVAVVRSPYRERFGTPRQPQVTASVLHGGAQEGQIVFLRGRGYEEALQDLSGFDMIWVLTHMHLNKGWNPKVRPPRLPEERKGLFSTRSPHRPNAIALSSLRVGRVDAANGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPNVKAGWLDALGSDHERQGDFLPKFSVGATLVHT 615          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A835YNQ9_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ9_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.000e-64
Identity = 98/154 (63.64%), Postives = 124/154 (80.52%), Query Frame = 0
Query:  380 IALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEELGSNHE 533
            I ++RSPY+ERFGTPRQ  VTA VL+G+AQ GQ++F +G  +E AL+DLDGFD +WV+S+MHLN+GWN KV+PPR P  ++GLFSTRSPHRPN +ALS++++  VD     + V GLDLLDGTP+LDIKPY+ YCDAFP A+ GWLEEL S  E
Sbjct:    6 IGVVRSPYKERFGTPRQANVTAGVLEGKAQHGQLVFSRGRNFEVALEDLDGFDYVWVISYMHLNQGWNPKVKPPRGPRVKRGLFSTRSPHRPNSIALSAVKIVSVDPKGLTVTVEGLDLLDGTPILDIKPYVPYCDAFPGAKTGWLEELSSIDE 159          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A7S3XP01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP01_HETAK)

HSP 1 Score: 197 bits (502), Expect = 9.610e-56
Identity = 95/175 (54.29%), Postives = 127/175 (72.57%), Query Frame = 0
Query:  352 LCSRPKERGTYTDAFVDAAAKMEITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERK-GLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWL 525
            L ++P++   YT+ F    +   ++   IA++RSPY+ERFGTPRQP VT   L G AQ G+I+F K   +E ALQDL+GF+  W++++ HLN+GWN KV+PPR   + K GLF+TRSPHRPNP+ LS+ ++  VD  +GV+ V GLDLLDGTPVLD+KPY+ Y DAFP AR GWL
Sbjct:   52 LTNKPQQ--FYTEQFTTPES---VSMETIAVVRSPYKERFGTPRQPVVTKGTLGGSAQIGEIVFKKNRNFEIALQDLEGFEYCWLITYFHLNKGWNPKVKPPRGKHDAKLGLFATRSPHRPNPIGLSACKIHSVDHRQGVVRVAGLDLLDGTPVLDLKPYVPYADAFPHARAGWL 221          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A7S1WEL1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEL1_ALECA)

HSP 1 Score: 194 bits (492), Expect = 1.060e-54
Identity = 91/183 (49.73%), Postives = 129/183 (70.49%), Query Frame = 0
Query:  354 SRPKERGTYTDAFVDAAAKMEITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEAL--QDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEELGSNHEG 534
            SRP +   +TDAF      +++T R I ++RSPY+ERFG PRQP ++  VL G AQEG I FL     + AL  +DL+GF+ IW++ ++HLN GW+ +V PPR   +++GLF+TRSPHRPN ++LS+ ++  VD     + V GLDLLDGTPVLD+KPY+ YCD++P AR GW++E+   H+G
Sbjct:   25 SRPPQ--VHTDAF---PTPLQVTLRTIGVVRSPYKERFGCPRQPPISKGVLGGSAQEGTIQFLDNPDGDIALALKDLEGFERIWIVGYLHLNEGWSPRVTPPRGARQKRGLFATRSPHRPNHISLSACQLLSVDAKAKTLTVRGLDLLDGTPVLDVKPYVPYCDSYPSARAGWIDEVEGEHDG 202          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A7V8E2B3_9BACT (TsaA-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V8E2B3_9BACT)

HSP 1 Score: 191 bits (486), Expect = 2.470e-54
Identity = 91/149 (61.07%), Postives = 115/149 (77.18%), Query Frame = 0
Query:  380 IALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEEL 528
            I  +RSPY+ERFGTPRQP VT   L+ RA E  I  L G  +E+AL+DL+GFD IWVL+ +HLN GW+ +V PPR PE ++GLF+TR+PHRPNP++LS+LR+  + +   V+ V G+DLLDGTPVLDIKPYI Y DAFPDAR GWL+ L
Sbjct:   25 IGHVRSPYKERFGTPRQPPVTEQTLEDRALEASIELLPGRNFEQALKDLEGFDYIWVLAWLHLNEGWSPQVIPPRGPEVKRGLFATRAPHRPNPISLSALRL--LGIEGRVLKVRGIDLLDGTPVLDIKPYIPYSDAFPDARTGWLKGL 171          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A0G4F040_VITBC (TsaA-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F040_VITBC)

HSP 1 Score: 192 bits (489), Expect = 1.260e-53
Identity = 90/162 (55.56%), Postives = 118/162 (72.84%), Query Frame = 0
Query:  368 DAAAKMEITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVR--PPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEE 527
            DA     I   PI ++RSPY+ERFGTPRQP VT   L G  Q   +  L+GHGYE  L+D++GF+ +W++++MHLN+GW  KVR  P +LP  R GLF+TR+PHRPN +ALS++ V  VDV  G +++ GLDLLDGTPVLDIKPY+ Y DAFPD+  GWL++
Sbjct:   80 DADVPEAIEMHPIGVVRSPYKERFGTPRQPVVTEGTLGGVKQNATVQLLRGHGYEACLEDVEGFERVWLITYMHLNQGWRSKVRVYPRKLPR-RLGLFATRAPHRPNQLALSAVEVVGVDVDAGQLHILGLDLLDGTPVLDIKPYVPYADAFPDSAAGWLDQ 240          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A6N6JQK0_9BACT (tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO n=3 Tax=Bacteria TaxID=2 RepID=A0A6N6JQK0_9BACT)

HSP 1 Score: 189 bits (481), Expect = 1.320e-53
Identity = 92/162 (56.79%), Postives = 121/162 (74.69%), Query Frame = 0
Query:  369 AAAKMEITYRPIAL--IRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEEL 528
            A  K   T+  +A+  +RSPY+ERFGTPRQP VTA  L+ RA + +I  L    +E+ALQDL+GF+ IWVL+ +HLN GWN +V PPR P+ ++GLF+TR+PHRPNP+ LS+LR+ RV+    V++V G+DLLDGTPVLD+KPY+ Y DAF  AR GWLE L
Sbjct:   12 AGQKAPATFTCVAIGHVRSPYKERFGTPRQPVVTAQTLEDRALDARIELLPAMNFEQALQDLEGFEYIWVLAWLHLNSGWNPQVMPPRGPKVKRGLFATRAPHRPNPIGLSALRLIRVEGR--VLHVRGIDLLDGTPVLDVKPYVPYSDAFAAARAGWLEGL 171          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: UPI001AD54E4C (tRNA (Adenine(37)-N6)-methyltransferase n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001AD54E4C)

HSP 1 Score: 185 bits (469), Expect = 7.410e-52
Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = 0
Query:  370 AAKME-ITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEELGSN 531
            AA++E +    I  + SPY+ERFGTPRQP VT   L  RAQE  I  + G  +E+AL+DL+GF+ IWVL+ +HLN GWN +V PPR P+ ++GLF+TR+PHRPN + LS+L++  V +    + V G+DLLDGTPVLDIKPYI Y DAFP AR GWLE L S+
Sbjct:   14 AARVERVECEIIGYVHSPYKERFGTPRQPPVTEQTLDDRAQEAMIELVPGRNFEQALKDLEGFEYIWVLAWLHLNEGWNPQVIPPRGPKVKRGLFATRAPHRPNSIGLSALKL--VGIDGRTLKVSGIDLLDGTPVLDIKPYIPYSDAFPKARAGWLEGLKSD 174          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: R1DL83_EMIHU (TsaA-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL83_EMIHU)

HSP 1 Score: 188 bits (477), Expect = 1.700e-51
Identity = 95/176 (53.98%), Postives = 119/176 (67.61%), Query Frame = 0
Query:  362 YTDAFVDAAAKMEITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERK-GLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEELGSNHEGQG 536
            YTDAF D AA   +T  PI +IRSPY+ERFGTPRQP VT  V  G AQ G I      G +  L+ L GFD  W ++ MHLN GW   VRPPR P   K G+F+TR+PHRPNP+ALS+L+V  VD +   + V GLDLLDGTPVLD+KPY+ Y D+FP A+ GW++E+ +  +  G
Sbjct:   32 YTDAFADHAAA-PVTLTPIGVIRSPYKERFGTPRQPTVTTQVSGGGAQRGCIELRPDAGLDHTLRGLAGFDYCWAITLMHLNAGWKPLVRPPRGPRRAKQGVFATRAPHRPNPIALSALKVVEVDEAALRVTVEGLDLLDGTPVLDLKPYVPYADSFPRAKAGWVDEVRAEEDRLG 206          
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Match: A0A812QIS2_9DINO (TrmO protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QIS2_9DINO)

HSP 1 Score: 187 bits (475), Expect = 1.870e-51
Identity = 92/180 (51.11%), Postives = 124/180 (68.89%), Query Frame = 0
Query:  354 SRPKERGTYTDAFVDAAAKMEITYRPIALIRSPYRERFGTPRQPQVTASVLQGRAQEGQIIFLKGHGYEE-----ALQDLDGFDMIWVLSHMHLNRGWNRKVRPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLDGTPVLDIKPYIGYCDAFPDARIGWLEEL 528
            SRP +   +TDAF      ME++ + +A++RSPY+ERFG PRQP VT  VL G A  G +  +      E     AL++L GF+ IWV+S++H+N GW+  V PPR P  ++GLF+TR+PHRPN + LS+ R+  VD ++  + VHGLDLLDGTPVLDIKPY+ YCD+F  AR GWLEE+
Sbjct:   68 SRPPQ--VHTDAF---PTPMEVSMQTLAVVRSPYKERFGCPRQPTVTEGVLGGEAGAGFLELVPSDQNPEEKLRMALRELSGFEFIWVISYLHMNEGWSASVTPPRGPRRKRGLFATRAPHRPNHIGLSACRLLGVDAAKLQVSVHGLDLLDGTPVLDIKPYVPYCDSFAGARAGWLEEI 242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12637.1964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBB4_9PHAE6.030e-20860.87TsaA-like domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YNQ9_9STRA1.000e-6463.64TsaA-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3XP01_HETAK9.610e-5654.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1WEL1_ALECA1.060e-5449.73Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7V8E2B3_9BACT2.470e-5461.07TsaA-like domain-containing protein n=1 Tax=Planct... [more]
A0A0G4F040_VITBC1.260e-5355.56TsaA-like domain-containing protein n=2 Tax=Vitrel... [more]
A0A6N6JQK0_9BACT1.320e-5356.79tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyl... [more]
UPI001AD54E4C7.410e-5255.83tRNA (Adenine(37)-N6)-methyltransferase n=2 Tax=Pl... [more]
R1DL83_EMIHU1.700e-5153.98TsaA-like domain-containing protein n=1 Tax=Emilia... [more]
A0A812QIS2_9DINO1.870e-5151.11TrmO protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023370TrmO-like, N-terminal domainPFAMPF01980TrmOcoord: 392..515
e-value: 4.1E-36
score: 123.8
IPR023370TrmO-like, N-terminal domainTIGRFAMTIGR00104TIGR00104coord: 373..520
e-value: 1.7E-33
score: 113.8
IPR023370TrmO-like, N-terminal domainPROSITEPS51668TSAA_2coord: 377..519
score: 65.23
IPR036414YaeB, N-terminal domain superfamilyGENE3D2.40.30.70coord: 376..529
e-value: 1.3E-44
score: 153.5
IPR040372YaeB-likePANTHERPTHR12818UNCHARACTERIZEDcoord: 361..543
IPR036413YaeB-like superfamilySUPERFAMILY118196YaeB-likecoord: 373..527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12637contigH-elongata_contig12637:1692..4705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12637.1964.1mRNA_H-elongata_contig12637.1964.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12637 1305..5057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12637.1964.1 ID=prot_H-elongata_contig12637.1964.1|Name=mRNA_H-elongata_contig12637.1964.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=582bp
MSIKAHISEGIKSAGCGYAQARRPAKLLLLPSAAFIGAGRFLPHSDCQEH
LVTLGQARAATTGLNELRVLYVSCSWSNHGRGERDWDARDFKTTRDFLQR
NPNLVFVYVGRSCMVSDSDNSLRASQLRHVPCALMRADCMLILPPHSGNL
AWEADSPMIKCQHHSDLRSHALGSWARMELALAAMGQAKVYVAFRAVPYP
ESVFELEPGKSNVRDIVKKAVDTLKNDAGPSGAGEANAMTGNVSFEIDVT
AKVGAQGNGVDNKLMASTAAVMEACENWLSADLNPLKALEEARVVVTVAE
KHGNVKVLESVRRMHPISPSDKLIVGVRAALGEEHIKGSGELALCLLLFS
VLCSRPKERGTYTDAFVDAAAKMEITYRPIALIRSPYRERFGTPRQPQVT
ASVLQGRAQEGQIIFLKGHGYEEALQDLDGFDMIWVLSHMHLNRGWNRKV
RPPRLPEERKGLFSTRSPHRPNPMALSSLRVKRVDVSRGVIYVHGLDLLD
GTPVLDIKPYIGYCDAFPDARIGWLEELGSNHEGQGDFLSKFSVGAALVH
TVNSSQNDGASSSTILVNQTEDASSTDFVNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023370TrmO-like_N
IPR036414YaeB_N_sf
IPR040372YaeB-like
IPR036413YaeB-like_sf