prot_H-elongata_contig12591.1930.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12591.1930.1
Unique Nameprot_H-elongata_contig12591.1930.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length434
Homology
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.540e-33
Identity = 120/419 (28.64%), Postives = 161/419 (38.42%), Query Frame = 0
Query:   26 GSIRGFSLTAPLISSDSSTCSNGFPGIQSSEGAKNVCCSAECGRCGGRGCSDLVGG----DENCCVSTIYDNGGLCSTLGAAPCIIYDDEADSWAPTETSSTSSLSGTEYFGSSSSPTPSPTEKASVLLPGYVTGTSYMGCFEETGSDPFDYRADIQSMKPSMCYDECVSKGALYMGLMGSEECACGDDNDYLDTDKTAGNCDXXXXXXXXXXXXGDAFGLYEIMSISSSDAAVNSADIDGNGEIDGYAYMDCNDF-DGEAPFDAVLADDNMTPEMCFEICAIVSARYFGVYAGKECGCGSNSDYIVF------GGTPGTCDMSCAGDSAYSCGGTDAYDLYQLVDYNIGLDSSHDGGLLECSNGIPGVESADGSVCCAAACGTCDGSRCVGTGGCCAEYIKTKYEYCSEEMEAPCIID 433
            G  RG SL     S+ + TCSNG  GI+S+ G  +VCC   CG CGG  C++        D +CC   I  +G  CS    APCII D   +S   T     S+  G E                     G  +G   + C  E                  +C     ++ AL  GL   + C         D  K    C              D  G   +   S+                  Y  + C    D E PF       ++T E C+E+CA  S+ YFG+  G  C CG    ++          T  TC  +C G    +CGG  A+DLYQ+              L  C+ GI GVE+A G VCC  +CG C G RCVG GGCC   I+++ + C     APC+ +
Sbjct:   37 GDARGRSLQ----SATTQTCSNGIEGIESANG--DVCCPTACGFCGGEACTEAAVNAGLDDGDCCFGDIIVSGASCSENQMAPCIIDDASQESAGDT----CSNTDGVE---------------------GISSGDGDVCCPSEC----------------VLCGGRDCTEAALAAGLADGDCCVS-------DITKEGVKCSDSGAAPCVAYDSEDETGSPLVQEASTPV----------------YIALGCGKIGDYEDPFTVSSTVSDLTAEACYELCASESSLYFGLVEGNVCSCGDEETFVETFLDTYDEQTAATCSTACPGSPDETCGGAQAFDLYQI--------------LPTCTGGIVGVEAASGDVCCPFSCGECGGDRCVGEGGCCEHTIQSREDLCEYTNAAPCVFN 371          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.960e-24
Identity = 101/352 (28.69%), Postives = 133/352 (37.78%), Query Frame = 0
Query:   43 STCSN--GFPGIQSSEGAKNVCCSAECGRCGGRGCSDLVGGDENCCVSTIYDNGGLCSTLGAAPCIIYDDEADSWAPTETSSTSSLSGTEYFGSSSSPTPSPTEKASVLLPGYVTGTSYMGCFEETGSDPFDYRADIQSMKPSMCYDECVSKGALYMGLMGSEEC------ACGDDNDYLD--------TDKTAGNCDXXXXXXXXXXXXGDAFGLYEIM------------SISSSDAAVNSADIDGNGEIDGYAYMDCNDFDGEAPFDAVLAD--DNMTPEMCFEICAIVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSAYSCGGTDAYDLYQLVDYNIG 364
            STC N  G PG++S     + CC   C  CGG GCS   G   +CCVS I   G  C   G APC I D                       G + +PTP P     V +             E T   P             +C     S G   +     + C      AC  DN YLD         ++T   CD            G  FG Y               +IS  +      DIDG+G +D Y ++ C      A  +    D  + MT  +CFE CA  SA YF ++ G  C CG+   Y+      G CD  C+GD   +CGG   YDLY+L++ ++G
Sbjct: 2979 STCPNAGGIPGVESP--GSSACCPTSCVSCGGVGCSSR-GEVTDCCVSAIMTKGQACEVSGTAPCYIGDG----------------------GEAPAPTPEPVRPTPVTM-------------EPTTEPP------AAPTTQGLC-----SNGVPGIESASGDYCCPATCRACDGDNCYLDGLFCCGDDIEETGVLCDDSEEAPCIIDIDGGGFGTYAPTGAPTGTPFDFDPTISGGNDDSMDVDIDGDGNVDSYEHVGCYALSPTASVELEKLDGEEQMTKMLCFEACAAESADYFALFKGSVCTCGNEGGYLTMPMEMGICDTPCSGDVTATCGGYYDYDLYELMESDVG 3281          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: A0A0F4ZFK6_9PEZI (Uncharacterized protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZFK6_9PEZI)

HSP 1 Score: 84.0 bits (206), Expect = 1.180e-13
Identity = 68/214 (31.78%), Postives = 94/214 (43.93%), Query Frame = 0
Query:  151 PGYVTGTSYMGCFEETGSDPFDYRADIQS-MKPSMCYDECVSKGALYMGLMGSEECACGDDNDYLDTDKTAGNCDXXXXXXXXXXXXG-DAFGLYEIMSISSSDAAVNSADIDGNGEIDGYAYMDCNDFDGEAPF--DAVLADDNMTPEMCFEICAIVSARYFGVYAGKECGCG---SNSDYIVFGGTPGTCDMSCAGDSAYSCGGTDAYDLYQ 357
            P  ++GT Y+GCF+E  +     RA  Q+ M   +C   CV  G LY G     EC CG++   L  D T  +C             G D   +Y   +I                 I GYAY  C      A     +   D+ MT EMC   C++    YFGV  G +C CG   SN+  I+    P +C M+C G+S+ +CGG+D   LY+
Sbjct:  159 PATISGTPYLGCFQEAATRVLPNRALAQANMTAEICLANCV--GYLYFGTEYGNECWCGNNKPDLLADAT--DCSMVCAGDDEQLCGGPDRLTVYGPQAIKQDTLP----------SIAGYAYQGCYSDSATARVLTGSFYYDEAMTLEMCATDCSLY--EYFGVEYGTQCYCGTSVSNTSAIM---PPTSCTMTCGGNSSETCGGSDRISLYK 353          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: A0A6H5L0X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X8_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 4.560e-9
Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 0
Query:  271 YMDC-NDFDGEAPFDAVLADDNMTPEMCFEICAIVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSAYSCGGTDAYDLY 356
            Y+ C  D      F  V   D+MT  +C + CA     Y+G   G+EC CG+N+DY V+G    TCDM C GDS+ +CGG +A   Y
Sbjct:   86 YLGCFGDSQTGRVFPVVFGSDSMTTAICADTCA--EYAYYGTQYGRECWCGNNADYAVYGEV--TCDMECTGDSSATCGGFNAMSFY 168          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: D8LSQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ5_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.070e-8
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   45 CSNGFPGIQSSEGAKNVCCSAECGRCGGRGCSDLVGGDE-NCCVSTIYDNGGLCSTLGAAPCII 107
            CSN   GI+       VCC+AECG+CGG GC  + G D  NCC++ + +N  LCS  GAAPC+I
Sbjct:   44 CSNSMNGIEGINENGVVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNQELCSVAGAAPCVI 107          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.830e-8
Identity = 35/76 (46.05%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   36 PLISSDSSTCSNGFPGIQSSEGAKNVCCSAECGRCGGRGCSDLVGGDENCCVSTIYDNGGLCSTLGAAPCIIYDDE 111
            P  S  + TC  G  G+Q    A NVCC+  CG CGG GCSD  GG++NCC   I      CS  G APCI+   E
Sbjct:  491 PAPSRAAGTCEGGIVGVQ----ASNVCCALSCGSCGGDGCSDRDGGEDNCCGVEIRTANLDCSVTGEAPCIVTSPE 562          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.200e-8
Identity = 41/98 (41.84%), Postives = 48/98 (48.98%), Query Frame = 0
Query:   14 MLPHSFSCFPPPGSIRGFSLTAPLISSDSST-----CSNGFPGIQSSEGAKNVCCSAECGRCGGRGCSDLVGGDENCCVSTIYDNGGLCSTLGAAPCI 106
            +L     C   P  I   S T P  ++ + T     C  G  GIQ    AK VCCSA CG CGG GCS   GG + CC   +  +G LCS  G APCI
Sbjct:  103 VLDAGIECGEAPCVIDASSSTTPAPATPAPTSEVPMCDGGIVGIQ----AKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCSVTGEAPCI 196          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: A0A6H5J9S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S1_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 6.940e-8
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   61 VCCSAECGRCGGRGCSDLVGGDE-NCCVSTIYDNGGLCSTLGAAPCII 107
            VCC+AECG+CGG GC  + G D  NCC++ + DN  LCS +GAAPC+I
Sbjct:   13 VCCTAECGQCGGEGCGSVPGLDNTNCCINGVLDNQELCSVVGAAPCVI 60          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.060e-6
Identity = 55/185 (29.73%), Postives = 80/185 (43.24%), Query Frame = 0
Query:  180 MKPSMCYDECVSKGALYM--GLMGSEECACGDDNDYLDTDKTAGNCDXXXXXXXXXXXXG-DAFGLYEIMSISSSDAAVNSADIDGNGEIDGYAYMDC-NDFDGEAPFDAVLADDNMTPEMCFEICAIVSA--RYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSAYSCGGTDAYDLYQL 358
            M P++C D C  + + Y         EC C D++  L     A  CD            G D+F LY++      +  + S   D N       Y+ C  D   +    A  + + MT E C   CA  S    Y+    G EC C +   ++  G   GTCDM+C GD+  +CGG DA+DL++L
Sbjct:    1 MTPTVCADYCRGQPSSYTHYATQYGRECWCQDESVDLRRHGAA-TCDYQCSGDDSIVCGGFDSFSLYDL-----EEGELPSPPTDDN-------YVGCFADDQNDRVLGAKSSSNEMTSEACASYCADESPGNTYYATQWGHECWCAAEV-HLRHG--DGTCDMACTGDAGTTCGGFDAFDLFEL 169          
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Match: A0A1B9HB06_9TREE (Uncharacterized protein n=2 Tax=Kwoniella heveanensis TaxID=89924 RepID=A0A1B9HB06_9TREE)

HSP 1 Score: 62.0 bits (149), Expect = 1.100e-6
Identity = 53/190 (27.89%), Postives = 83/190 (43.68%), Query Frame = 0
Query:  179 SMKPSMCYDECVSKGALYMGLMGSEECACGDD-NDYLDTDKTAGNCDXXXXXXXXXXXXGDAFGLYEIMSISSSDAAVNSADIDGNGEI----DGYAYMDC--NDFDGEAPFDAVLADDNMTPEMCFEICAIVSARYFGVYAGKECGCGSN-SDYIVFGGTPGTCDMSCAGDSAYSCGGTDAYDLYQLVD 360
            SM  + C + C ++G    G+    EC CG   ++    +K + NC+            G        +++  + A V+    D + +      G++ + C      G A   A  + ++MTPE C   CA +  +Y GV  G EC C  + S+      T   C MSC+GD A  CGG++A  LYQ  D
Sbjct:  210 SMTFNQCTNYCQNQGYPLAGVEYGSECYCGAVLSNGASLNKPSSNCNVKCAGASDLKCGGP-----RALTLFVNQAGVSGLSSDYSSKPVNLPSGWSSVSCIKEATSGRALASARTSSNSMTPETCINYCAGLGWQYAGVEYGSECYCADSLSNGADLSLTSTGCTMSCSGDKAQICGGSNAVQLYQNPD 394          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12591.1930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FJ60_ECTSI1.540e-3328.64WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJ68_ECTSI3.960e-2428.69WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0F4ZFK6_9PEZI1.180e-1331.78Uncharacterized protein n=1 Tax=Thielaviopsis punc... [more]
A0A6H5L0X8_9PHAE4.560e-941.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSQ5_ECTSI1.070e-850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3U7_ECTSI1.830e-846.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWJ0_9PHAE2.200e-841.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9S1_9PHAE6.940e-858.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQX7_ECTSI1.060e-629.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1B9HB06_9TREE1.100e-627.89Uncharacterized protein n=2 Tax=Kwoniella heveanen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 268..359
e-value: 0.0091
score: 12.9
coord: 156..246
e-value: 0.0013
score: 22.0
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 285..349
e-value: 4.0E-10
score: 39.8
coord: 159..236
e-value: 6.9E-10
score: 39.0
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 156..246
score: 9.001
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 268..359
score: 8.919
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 277..413
coord: 60..247
NoneNo IPR availablePANTHERPTHR24269:SF16coord: 277..413
NoneNo IPR availablePANTHERPTHR24269:SF16coord: 60..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12591contigH-elongata_contig12591:3628..7060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12591.1930.1mRNA_H-elongata_contig12591.1930.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12591 1049..7209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12591.1930.1 ID=prot_H-elongata_contig12591.1930.1|Name=mRNA_H-elongata_contig12591.1930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=434bp
MPYPAVVLNWMYWMLPHSFSCFPPPGSIRGFSLTAPLISSDSSTCSNGFP
GIQSSEGAKNVCCSAECGRCGGRGCSDLVGGDENCCVSTIYDNGGLCSTL
GAAPCIIYDDEADSWAPTETSSTSSLSGTEYFGSSSSPTPSPTEKASVLL
PGYVTGTSYMGCFEETGSDPFDYRADIQSMKPSMCYDECVSKGALYMGLM
GSEECACGDDNDYLDTDKTAGNCDSTCAGVDSICGGGDAFGLYEIMSISS
SDAAVNSADIDGNGEIDGYAYMDCNDFDGEAPFDAVLADDNMTPEMCFEI
CAIVSARYFGVYAGKECGCGSNSDYIVFGGTPGTCDMSCAGDSAYSCGGT
DAYDLYQLVDYNIGLDSSHDGGLLECSNGIPGVESADGSVCCAAACGTCD
GSRCVGTGGCCAEYIKTKYEYCSEEMEAPCIID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd