prot_H-elongata_contig12460.1852.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12460.1852.1
Unique Nameprot_H-elongata_contig12460.1852.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: D8LC10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC10_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.920e-92
Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSKDKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +ACTS VGFSIGDFLAQKGTSK+ FS+ RL RMAAFGFLFHGTISHFFYNALD  LPGTAAMTVIQK   V IDQV WAPIFTLIFF+WIG+TSGASP+EI AK+K+DLV GVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK
Sbjct:  142 KACTSFVGFSIGDFLAQKGTSKESFSYARLARMAAFGFLFHGTISHFFYNALDSALPGTAAMTVIQK---VIIDQVFWAPIFTLIFFTWIGVTSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 295          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A836CE62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE62_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.660e-70
Identity = 105/158 (66.46%), Postives = 126/158 (79.75%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSK-DKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +ACTSLVGFS+GD LAQK  +K ++F ++RL RMAAFGF+FHGTISHFFYN LD ++PG   + + QK   VF DQVLWAPIFT ++ +W+G+TSG SP E+  KIK DLV GVVGSW+VWPL H I FKFVP EQRLLYIN IQI YNVFLS++GS 
Sbjct:  130 KACTSLVGFSVGDTLAQKFVAKGERFDYQRLARMAAFGFMFHGTISHFFYNKLDEVIPGKTPLAIAQK---VFTDQVLWAPIFTFVYLTWMGVTSGLSPPEVGEKIKTDLVKGVVGSWSVWPLVHAIGFKFVPLEQRLLYINCIQIGYNVFLSVLGSN 284          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.470e-59
Identity = 92/158 (58.23%), Postives = 120/158 (75.95%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSK-DKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +A TS++GF +GDFLAQK  SK +K  +ERLGRMA+FG L HGT  HFFY  LD  +PGTAA+TV   A++VFIDQ +W PIF  +FF ++G   G SP+ + A+I+N+L + V GSWTVWP+AH INF+ +PT QRLLYINS+QI YN+FLSI+  +
Sbjct:  133 KALTSMIGFGLGDFLAQKFISKSEKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTV---ATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQR 287          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A7S2FYX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYX3_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.670e-59
Identity = 93/158 (58.86%), Postives = 118/158 (74.68%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSKD-KFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +A TS++GF++GD LAQ    K  ++   R  R+A+FGFL HGT  H+FY  LD  +PGT AM V  K   V IDQVLW PIF ++FFS++G T+G  P  +AAK+K DL++ V GSWTVWP+AH INF+F+PT QRLLYIN+IQIFYNVFLSIIG+K
Sbjct:  100 KALTSMIGFTLGDILAQNFVEKKGEYDIMRTIRLASFGFLIHGTTGHWFYGKLDKAIPGTGAMQVFSK---VGIDQVLWNPIFGVMFFSYMGFTNGDGPAAVAAKVKRDLMTQVTGSWTVWPIAHAINFRFIPTSQRLLYINTIQIFYNVFLSIIGNK 254          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.980e-59
Identity = 95/158 (60.13%), Postives = 118/158 (74.68%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSKD-KFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +ACTSL GF++GD LAQK  +KD ++ F R  R+ +FG L HG   H+FY  LD  LPGTA MTV   A++V IDQ +W PIF ++FFS++G+T G S ++I  KIK DL + V+GSWTVW  AHTINFKFVPT QRLLYINSIQI YNVFLS +G+K
Sbjct:   20 KACTSLTGFTVGDILAQKFINKDAEYDFMRTVRLGSFGALVHGPTGHWFYGMLDSKLPGTAPMTV---ATKVAIDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYNVFLSFLGNK 174          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A7S0BQD5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQD5_9RHOD)

HSP 1 Score: 190 bits (482), Expect = 8.270e-58
Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSKDKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGS 156
            +A TSLVGF++GD LAQK    ++F ++RL RMAAFG LFHG   H+FY  LD ++ GT  + VI K   V IDQ+LWAPIF + FF  +G   G S  EI AKI+NDLV+ V  SW VWPLAH INF+F+PTEQRLLYIN+IQI YNVFLSIIG+
Sbjct:  105 KALTSLVGFAVGDLLAQKYLGDEEFKYDRLLRMAAFGALFHGPTGHYFYGFLDRLIVGTEPLKVISK---VAIDQLLWAPIFGVAFFGILGAMEGKSVKEIKAKIENDLVTAVTTSWKVWPLAHAINFRFIPTEQRLLYINAIQIGYNVFLSIIGN 257          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A5J4YL21_PORPP (Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL21_PORPP)

HSP 1 Score: 191 bits (484), Expect = 9.570e-58
Identity = 94/159 (59.12%), Postives = 115/159 (72.33%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQK--GTSKDKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +A TS VGFS+GD LAQK  G         RLGRMAAFGFL HG   H+FY ALD  +PGT A  V   AS+V IDQ+LWAPIFT++FF++IG   G S ++I  K+K D  +GV GSW VWPL HTINF+F+P+ QRLLYIN+IQI YN+FLS+I +K
Sbjct:  132 KAMTSFVGFSLGDILAQKFLGPKNAALDMNRLGRMAAFGFLIHGPTGHYFYGALDRAIPGTEAWKV---ASKVAIDQILWAPIFTVMFFAFIGAMEGRSVDDIKQKVKRDTWTGVTGSWKVWPLVHTINFRFIPSSQRLLYINTIQIAYNMFLSLIANK 287          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A7S2XWX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX9_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.630e-56
Identity = 90/157 (57.32%), Postives = 111/157 (70.70%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTSK-DKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGS 156
            +A TSLVGFS+GD LAQK  S  + F F R+ R+A+FG LFHG + H+FY  LD  +PGTA   V   AS+V IDQ++W PIF   F  ++G   G +  E+  KIKNDLV  V GSWTVWP+AH INF+F+PT QRLLYINSIQ+FYN FLS + S
Sbjct:  133 KALTSLVGFSLGDILAQKFLSAGEPFDFLRMARLASFGLLFHGPVGHYFYGFLDTKIPGTALSVV---ASKVAIDQIIWNPIFGTFFLGYMGFAEGKNAGEVGQKIKNDLVKAVTGSWTVWPIAHAINFRFIPTSQRLLYINSIQVFYNCFLSFLAS 286          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A6S9LPN5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LPN5_HETAK)

HSP 1 Score: 182 bits (463), Expect = 4.790e-56
Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = 0
Query:    1 QACTSLVGFSIGDFLAQKGTS-KDKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            +A TSL GF+IGD LAQK  + +D +   R  RM AFG LFHG   H+FY  LDG LPGTA  TV   A++V IDQ++W PIF + FFS++G   G S  EI  KIKNDL++ V GSWTVW  AH INF+F+P+ QRLLYINSIQI YN+FLS +G+K
Sbjct:   20 KALTSLTGFTIGDILAQKFINPEDDYDVARTVRMGAFGMLFHGPTGHYFYGFLDGKLPGTATTTV---ATKVAIDQLIWNPIFGVCFFSFLGAAEGKSGGEIVDKIKNDLMTAVTGSWTVWVPAHIINFRFIPSSQRLLYINSIQIGYNMFLSFLGNK 174          
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Match: A0A7S1UKV6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKV6_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.000e-55
Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 0
Query:    4 TSLVGFSIGDFLAQKGTSK-DKFSFERLGRMAAFGFLFHGTISHFFYNALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNEIAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 157
            TSLVGFS+GD LAQ    K +KF F RL R+A+FGFL HGT+ H+FY  LDG  PGT A TV   A++V IDQVL+ P+F  IFF+++G+ +G S  ++ AKI+ D+ + VVGSWTVW  AHTINFKF+  +QRLLYIN++QI YN+FLS +G+K
Sbjct:   64 TSLVGFSLGDILAQLFVEKVEKFDFARLARLASFGFLLHGTMGHYFYGFLDGKFPGTNAATV---ATKVGIDQVLFNPVFGSIFFTYMGLAAGDSLGDVKAKIQRDIKTAVVGSWTVWVPAHTINFKFISPQQRLLYINTVQIGYNIFLSFLGNK 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12460.1852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC10_ECTSI1.920e-9286.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CE62_9STRA1.660e-7066.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9Q4_9STRA2.470e-5958.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FYX3_9STRA3.670e-5958.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z5E2_9STRA4.980e-5960.13Peroxisomal membrane protein-related n=1 Tax=Tribo... [more]
A0A7S0BQD5_9RHOD8.270e-5860.90Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YL21_PORPP9.570e-5859.12Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A7S2XWX9_9STRA1.630e-5657.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9LPN5_HETAK4.790e-5658.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1UKV6_9STRA1.000e-5558.06Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 91..152
e-value: 3.7E-19
score: 68.7
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 2..155
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 2..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 137..156
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12460contigH-elongata_contig12460:6828..7745 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12460.1852.1mRNA_H-elongata_contig12460.1852.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12460 6828..7745 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12460.1852.1 ID=prot_H-elongata_contig12460.1852.1|Name=mRNA_H-elongata_contig12460.1852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
QACTSLVGFSIGDFLAQKGTSKDKFSFERLGRMAAFGFLFHGTISHFFYN
ALDGMLPGTAAMTVIQKASRVFIDQVLWAPIFTLIFFSWIGITSGASPNE
IAAKIKNDLVSGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVF
LSIIGSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22