prot_H-elongata_contig122071.1687.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122071.1687.1
Unique Nameprot_H-elongata_contig122071.1687.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig122071.1687.1 vs. uniprot
Match: D7FP69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 3.360e-18
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:    1 MSVSICVPGVLKDEADIQRAWGVEPRGESVSARERLRRFYYVYNRDKV 48
            M VSICVPGVLKD+AD+QR WGVEPRG  VSA+ERLRRFYYV+NR KV
Sbjct:  261 MCVSICVPGVLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKV 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122071.1687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP69_ECTSI3.360e-1881.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122071contigH-elongata_contig122071:368..517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122071.1687.1mRNA_H-elongata_contig122071.1687.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122071 356..517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122071.1687.1 ID=prot_H-elongata_contig122071.1687.1|Name=mRNA_H-elongata_contig122071.1687.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MSVSICVPGVLKDEADIQRAWGVEPRGESVSARERLRRFYYVYNRDKVC*
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