prot_H-elongata_contig122059.1686.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122059.1686.1
Unique Nameprot_H-elongata_contig122059.1686.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
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BLAST of mRNA_H-elongata_contig122059.1686.1 vs. uniprot
Match: D8LRN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN5_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.240e-11
Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:   22 EPAVAQVEGGDGDIGVVSFVVGQRATIKTTGQKKKLVVGLFKLSADVVRLVVPSKEPAAYLQAEARSS 89
            +PAVAQVE     +G VSFVV   A IK+  Q KKL VG+ +LSA+V   +VP+KE AAYLQA+A ++
Sbjct:  413 KPAVAQVEXXXXGMGAVSFVVETPADIKSNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNN 480
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BLAST of mRNA_H-elongata_contig122059.1686.1 vs. uniprot
Match: A0A6H5KAH2_9PHAE (DUF4139 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH2_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.240e-6
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:   35 IGVVSFVVGQRATIKTTGQKKKLVVGLFKLSADVVRLVVPSKEPAAYLQAE 85
            +G VSFVV   A IK+  + KKL VG+ +LSA+V   VVP+KE AAYLQA+
Sbjct:  233 MGAVSFVVETPADIKSNARAKKLTVGVLQLSAEVSHYVVPAKESAAYLQAK 283
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122059.1686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRN5_ECTSI4.240e-1154.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAH2_9PHAE1.240e-656.86DUF4139 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122059contigH-elongata_contig122059:867..1522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122059.1686.1mRNA_H-elongata_contig122059.1686.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122059 867..1522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122059.1686.1 ID=prot_H-elongata_contig122059.1686.1|Name=mRNA_H-elongata_contig122059.1686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
PGLVGGSELFSAPPQPQLPTAEPAVAQVEGGDGDIGVVSFVVGQRATIKT
TGQKKKLVVGLFKLSADVVRLVVPSKEPAAYLQAEARSSF*
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