prot_H-elongata_contig12123.1627.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12123.1627.1
Unique Nameprot_H-elongata_contig12123.1627.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length495
Homology
BLAST of mRNA_H-elongata_contig12123.1627.1 vs. uniprot
Match: D7FJX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 9.070e-88
Identity = 221/433 (51.04%), Postives = 265/433 (61.20%), Query Frame = 0
Query:   96 EEEHTRFSRESAKARESAALAVSE-------AEGATQVAVWEVRSLREELGKARERXXXXXXXXXXXXXXXSAATR-------AELDGLREAVQAAEAAKERAEDGLARMKDKRKRDLQEVRRLNERMMEQQDSRHEQVGQLETAASDLRAKIVVLEERHACREEELANQEGGAVGEGVPVDGGGGEEHQREKKRIKEKEKELSLLRKLSEKLQREVEGLKSDLEAAASSKQEADDARESLAAALGRANARIAELTSKSAQLTRARSAMVAQIRALEEQASAAALKQASAARPA-AFVSNDQDATGVAASSAPLK-------VDMPPL--ETPMRQRXXXX-----QGVGSLDLEHGGG-----SRTALMQPGDHVKALLISCATGPACVEAAEGNPGWLTWLQHLPPQRLWTAAIVYLVLLHLVALYKTVVC 494
            E+EH +    +A A E +ALA+SE       AE A QVA WE +SLREEL   RER               +AATR       AEL+GLR AV AAEA +E+AE+GLAR+K+K+KRDLQEVRRLNERMME Q +R E+V  LE +  +LRAK   LE  HA  +EE  +Q                        R +E+EKELSLLRKL EKLQREVEGLKSDLE  ++ + +A +A+   AAALGRANARIAELTSKSAQLTRARSAMVAQI ALEEQ  +AALKQA+AA    A  +N  D+  VA  S PL+          PP+  + PMRQR            G+LDLE GGG        A  +PGDHVK+LLISCA+ P     +E  PG +TWL   PPQ LWTAAI YL L+HL+A YK + C
Sbjct:   11 EKEHAQTLAAAASAHERSALALSETRGALSEAESAAQVAAWESKSLREELEGLRERSEELSSELEATRSREAAATRTAREGVGAELEGLRGAVGAAEAGREQAEEGLARLKEKKKRDLQEVRRLNERMMELQQARREEVSDLEGSLQELRAKTDELE--HALAQEEQ-HQGXXXXXXXXXXXXXXXXXXXXXGPRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAQNAKNVSAAALGRANARIAELTSKSAQLTRARSAMVAQINALEEQLKSAALKQAAAATAGGAAETNTTDSGSVADFSTPLRDLSEVPPPSQPPMSADPPMRQRQRHRLSGAGPSSGNLDLEDGGGYFDEDEHKAQAKPGDHVKSLLISCASSPVGAAISERLPGLVTWLHQQPPQTLWTAAIAYLALVHLLAGYKAITC 440          
BLAST of mRNA_H-elongata_contig12123.1627.1 vs. uniprot
Match: A0A6H5L1J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J2_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 9.010e-66
Identity = 237/614 (38.60%), Postives = 300/614 (48.86%), Query Frame = 0
Query:    6 ENQNLRSQVSVAESTIDGMNSARAELEEKVASLREKLEATEA-------------------ERXXXXXXLQREL-QKWEARL--EEGVGVERARAVGKEREVLVLRAELSKAEEEHTRFSRESAKARESAALAVSEAEGA-------TQVAVWEVRSLREELGKARERXXXXXXXXXXXXXXXSAATR-------AELDGLREAVQAAEAAKERAEDGLARMKDKRKRDLQEVRRLNERMMEQQDSRHEQVGQLETAASDLRAKIVVL---------------------------------------------------------------------EERHACREEELANQEGGAVGEGVPVDGGGGEEHQREKKRIKEKEKELSLLRKLSEKLQREVEGLKSDLEAAASSKQEADDARESLAAALGRANARIAELTSKSAQLTRARSAMVAQIRALEEQASAAALKQASAARPAAFV-SNDQDATGVAASSAPLK-------VDMPPL--ETPMRQRXXXXQG-----VGSLDLEHGGG-----SRTALMQPGDHVKALLISCATGPACVEAAEGNPGWLTWLQHLPPQRLWTAAIVYLVLLHLVALYKTVVC 494
            E+  LR Q++ AE+TI  M++ RA   E+ A+LR +L A                      E       L+REL  + EA L  E   G ER  AV  EREV  LR +LS++E+EH +    +A A E +ALA+SE  GA        QVA WE +SLREEL   RER               +AATR       AE++GLR AV  AEA +E+AE+GLAR+KDK+KRDLQEVRRLNERMME Q +R E+V  LE +  +LRAK   L                                                                     EE+H C     A +E   VGEG+  +  GG++      R  E+EKELSLLRKL EKLQREVEGLKSDLE  ++ + +A+DA++   AALGRANAR                              +AALKQA+AA     V +N  D+  VA  S PL+          PP+  + PMRQR            G+LDLE GGG        A  +PGDH+K+LLISCA+ P     +E  PG +TWL   PPQ LWTAAI YL L+HL+A YKT+ C
Sbjct: 1192 ESSELRHQINAAEATIADMDATRAAANEETAALRAELAAAAXXXXXXXXXXXXXXXXXXXXELSAAQEMLRRELVAEREAALGAERREGAERVAAV--EREVEGLRVKLSESEKEHAQNLAAAAAAHERSALALSETRGALXXXXXVAQVAAWESKSLREELEGLRERSEELSSELEAARAREAAATRTAREGVGAEIEGLRRAVGTAEAGREQAEEGLARLKDKKKRDLQEVRRLNERMMELQQARREEVSDLEGSLQELRAKTGELGHALAKALSEKDHLQQAATAXXXXXXXXXXXXXXXXXXXXXXXXXPIPSEGTIPVPAGDPNPRPQEPRQEEQHQCGG---AREEMVRVGEGLRSEERGGDQ------RRDEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAEDAKDVSTAALGRANARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAALKQAAAATVGRAVETNTTDSGSVAGFSTPLRDLSEGPPPSQPPMSADPPMRQRQRHRLSGAGLSSGNLDLEDGGGYFDEDENKAQAKPGDHIKSLLISCASSPVGAAISERLPGLVTWLHQQPPQTLWTAAIAYLALVHLLAGYKTITC 1794          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12123.1627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJX5_ECTSI9.070e-8851.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1J2_9PHAE9.010e-6638.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..311
NoneNo IPR availableCOILSCoilCoilcoord: 78..112
NoneNo IPR availableCOILSCoilCoilcoord: 131..158
NoneNo IPR availableCOILSCoilCoilcoord: 160..212
NoneNo IPR availableCOILSCoilCoilcoord: 220..240
NoneNo IPR availableCOILSCoilCoilcoord: 14..62
NoneNo IPR availableCOILSCoilCoilcoord: 319..360
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 6..367
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..471
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 490..494
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 472..489
NoneNo IPR availableTMHMMTMhelixcoord: 472..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12123contigH-elongata_contig12123:421..7214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12123.1627.1mRNA_H-elongata_contig12123.1627.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12123 211..8192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12123.1627.1 ID=prot_H-elongata_contig12123.1627.1|Name=mRNA_H-elongata_contig12123.1627.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=495bp
MTVRGENQNLRSQVSVAESTIDGMNSARAELEEKVASLREKLEATEAERA
KLQERLQRELQKWEARLEEGVGVERARAVGKEREVLVLRAELSKAEEEHT
RFSRESAKARESAALAVSEAEGATQVAVWEVRSLREELGKARERSEELSA
AAEEARERGSAATRAELDGLREAVQAAEAAKERAEDGLARMKDKRKRDLQ
EVRRLNERMMEQQDSRHEQVGQLETAASDLRAKIVVLEERHACREEELAN
QEGGAVGEGVPVDGGGGEEHQREKKRIKEKEKELSLLRKLSEKLQREVEG
LKSDLEAAASSKQEADDARESLAAALGRANARIAELTSKSAQLTRARSAM
VAQIRALEEQASAAALKQASAARPAAFVSNDQDATGVAASSAPLKVDMPP
LETPMRQRQRQRQGVGSLDLEHGGGSRTALMQPGDHVKALLISCATGPAC
VEAAEGNPGWLTWLQHLPPQRLWTAAIVYLVLLHLVALYKTVVC*
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