prot_H-elongata_contig12113.1622.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12113.1622.1
Unique Nameprot_H-elongata_contig12113.1622.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.930e-17
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
Query:  130 CRPIGGTCSEGWGQCGGKNWEGPICCWPGAECLERNEWYSQCVPE 174
            CRP G  CSEGWGQCGG +WEGP CCWPGAEC+ERNE + QCVPE
Sbjct:  432 CRPRGDRCSEGWGQCGGLHWEGPECCWPGAECVERNEHFHQCVPE 476          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: G2QA39_MYCTT (Glucanase n=1 Tax=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) TaxID=573729 RepID=G2QA39_MYCTT)

HSP 1 Score: 61.6 bits (148), Expect = 6.340e-8
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 0
Query:  136 TCSEGWGQCGGKNWEGPICCWPGAECLERNEWYSQCVPETE 176
             C   W QCGG  W+GP CC  G+ C+ +NEWYSQC+P ++
Sbjct:   26 NCGAVWTQCGGNGWQGPTCCASGSTCVAQNEWYSQCLPNSQ 66          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: A0A437A0Y6_9PEZI (CBM1 domain-containing protein n=1 Tax=Arthrobotrys flagrans TaxID=97331 RepID=A0A437A0Y6_9PEZI)

HSP 1 Score: 60.1 bits (144), Expect = 1.510e-7
Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 0
Query:  141 WGQCGGKNWEGPICCWPGAECLERNEWYSQCVPETET 177
            WGQCGG  W GP  C  G+ C+  NEWYSQC+P T+T
Sbjct:    7 WGQCGGSGWTGPTTCVSGSTCVYSNEWYSQCIPGTQT 43          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: G1XCC5_ARTOA (CBM1 domain-containing protein n=7 Tax=Orbilia oligospora TaxID=2813651 RepID=G1XCC5_ARTOA)

HSP 1 Score: 60.1 bits (144), Expect = 1.570e-7
Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 0
Query:  141 WGQCGGKNWEGPICCWPGAECLERNEWYSQCVPETET 177
            WGQCGG  W GP  C  G+ C+  NEWYSQC+P T+T
Sbjct:   17 WGQCGGTGWTGPTACVSGSTCVYSNEWYSQCIPGTQT 53          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: I6LTQ2_RHIST (Cellulase n=1 Tax=Rhizopus stolonifer var. reflexus TaxID=219329 RepID=I6LTQ2_RHIST)

HSP 1 Score: 58.2 bits (139), Expect = 7.850e-7
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:  137 CSEGWGQCGGKNWEGPICCWPGAECLERNEWYSQCVP 173
            CS+ +GQCGGKNW GP CC  G+ C   N++YSQC+P
Sbjct:   26 CSKLYGQCGGKNWNGPTCCESGSTCKVSNDYYSQCLP 62          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: I1BVK4_RHIO9 (Cellulase n=2 Tax=Rhizopus TaxID=4842 RepID=I1BVK4_RHIO9)

HSP 1 Score: 58.2 bits (139), Expect = 8.380e-7
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:  137 CSEGWGQCGGKNWEGPICCWPGAECLERNEWYSQCVP 173
            CS+ +GQCGGKNW GP CC  G+ C   N++YSQC+P
Sbjct:   26 CSKLYGQCGGKNWNGPTCCESGSTCKVSNDYYSQCLP 62          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: A0A1Y3MVW9_PIRSE (Carbohydrate-binding module family 1 protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MVW9_PIRSE)

HSP 1 Score: 53.9 bits (128), Expect = 2.900e-6
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 0
Query:  141 WGQCGGKNWEGPICCWPGAECLERNEWYSQCVPETET 177
            WG+CGG  + GP CC  G  C   N+WYSQCVP T++
Sbjct:    1 WGKCGGSGYTGPTCCVEGYYCKYSNDWYSQCVPGTDS 37          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: A0A084GGY5_PSEDA (Glucanase n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084GGY5_PSEDA)

HSP 1 Score: 56.6 bits (135), Expect = 3.300e-6
Identity = 19/41 (46.34%), Postives = 27/41 (65.85%), Query Frame = 0
Query:  136 TCSEGWGQCGGKNWEGPICCWPGAECLERNEWYSQCVPETE 176
             C   WGQCGG  W G  CC  G  C+++N+WY QC+P+++
Sbjct:   27 ACQTVWGQCGGIGWSGATCCASGNTCVKQNDWYFQCLPDSQ 67          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: A0A2P6NMX5_9EUKA (Endoglucanase (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NMX5_9EUKA)

HSP 1 Score: 54.7 bits (130), Expect = 1.390e-5
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 0
Query:  136 TCSEGWGQCGGKNWEGPICCWPGAECLERNEWYSQCV 172
             CS  +GQCGGKNW G  CC    +C+  N+WYSQC+
Sbjct:  323 ACSNHYGQCGGKNWNGAFCCEAPYKCIFSNDWYSQCL 359          
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Match: A0A094CQN3_9PEZI (CBM1 domain-containing protein n=4 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094CQN3_9PEZI)

HSP 1 Score: 54.3 bits (129), Expect = 1.950e-5
Identity = 20/37 (54.05%), Postives = 23/37 (62.16%), Query Frame = 0
Query:  141 WGQCGGKNWEGPICCWPGAECLERNEWYSQCVPETET 177
            W QCGG+ W GP  C  G  C   N+WYSQC+P T T
Sbjct:   25 WAQCGGQGWTGPTSCISGYACTYSNDWYSQCIPGTNT 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12113.1622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KD35_9PHAE1.930e-1777.78CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
G2QA39_MYCTT6.340e-851.22Glucanase n=1 Tax=Myceliophthora thermophila (stra... [more]
A0A437A0Y6_9PEZI1.510e-759.46CBM1 domain-containing protein n=1 Tax=Arthrobotry... [more]
G1XCC5_ARTOA1.570e-759.46CBM1 domain-containing protein n=7 Tax=Orbilia oli... [more]
I6LTQ2_RHIST7.850e-759.46Cellulase n=1 Tax=Rhizopus stolonifer var. reflexu... [more]
I1BVK4_RHIO98.380e-759.46Cellulase n=2 Tax=Rhizopus TaxID=4842 RepID=I1BVK4... [more]
A0A1Y3MVW9_PIRSE2.900e-654.05Carbohydrate-binding module family 1 protein (Frag... [more]
A0A084GGY5_PSEDA3.300e-646.34Glucanase n=1 Tax=Pseudallescheria apiosperma TaxI... [more]
A0A2P6NMX5_9EUKA1.390e-554.05Endoglucanase (Fragment) n=1 Tax=Planoprotostelium... [more]
A0A094CQN3_9PEZI1.950e-554.05CBM1 domain-containing protein n=4 Tax=unclassifie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000254Cellulose-binding domain, fungalSMARTSM00236fcbd_2coord: 139..172
e-value: 3.4E-10
score: 49.9
IPR000254Cellulose-binding domain, fungalPFAMPF00734CBM_1coord: 141..168
e-value: 1.2E-9
score: 38.0
IPR000254Cellulose-binding domain, fungalPROSITEPS00562CBM1_1coord: 144..171
IPR000254Cellulose-binding domain, fungalPROSITEPS51164CBM1_2coord: 136..172
score: 11.652
NoneNo IPR availablePRODOMPD001821coord: 145..172
e-value: 8.0E-4
score: 99.0
IPR035971Cellulose-binding domain superfamilySUPERFAMILY57180Cellulose-binding domaincoord: 140..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12113contigH-elongata_contig12113:1855..4155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12113.1622.1mRNA_H-elongata_contig12113.1622.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12113 1791..4265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12113.1622.1 ID=prot_H-elongata_contig12113.1622.1|Name=mRNA_H-elongata_contig12113.1622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MRAEQRRLDPYRFEHVWRRRQLPRRILELRRHRDLVRWNAFRYYSSPSSF
SEMSTMKTPAPVYEIATMETPAPTIPETPAPTMPDTPAPTTEIIEVDTPA
PAYEDTTMLDTPAPSAMKAEPFNQPVQHICRPIGGTCSEGWGQCGGKNWE
GPICCWPGAECLERNEWYSQCVPETET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000254Cellulose-bd_dom_fun
IPR035971CBD_sf