prot_H-elongata_contig121081.1618.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121081.1618.1
Unique Nameprot_H-elongata_contig121081.1618.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.280e-18
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 0
Query:    1 MAVDGKRGIGRALNGLNVYDRLGYDVIGLQETRRSGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTSITRAAR-PPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            +AV+G  G GRA + L+   R    V+G+QETRR+GR+ F  AG+ V+C   CG+E GG  G   VG+A++ S+ + +    +FI + L+ +   L G   AV     YAP E   A +K  FW  LD
Sbjct:  123 LAVNGANGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFC---CGTETGGVHG---VGIAVKESLCKTSTFTTEFIDESLMAMRFLLAGHRGAVNFVAAYAPTEPSTADSKRVFWGKLD 244          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.390e-18
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 0
Query:    1 MAVDGKRGIGRALNGLNVYDRLGYDVIGLQETRRSGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTSITRAAR-PPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            +AV G  G GRA + L+   R    V+G+QETRR+GR+ F  AG+ V+C   CG+E GG  G   VG+A++ S+ + +    +FI +RL+ + L L G   AV      AP E   AS+K  FW  LD
Sbjct:   68 LAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFC---CGTETGGVHG---VGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLD 189          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: A0A6H5JLQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ6_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 4.020e-8
Identity = 36/98 (36.73%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    1 MAVDGKRGIGRALNGLNVYDRLGYDVIGLQETRRSGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTSITRAAR-PPKFISDRLLKVTLELRG 97
            +AV+   G G A + L+   R    V+G+QETRR+GR+ F  AG+ V+C   CG+E  G  G   VG+A++ S+ + +    +FI +RL+ +   L G
Sbjct:   95 LAVNRANGYGPAYSVLHEAARQDASVVGMQETRRAGRTEFAAAGFRVFC---CGTETDGVHG---VGIAVKESLCKTSTFTTEFIDERLMTMGFLLAG 186          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: A0A0C2FEX7_9BILA (Uncharacterized protein (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2FEX7_9BILA)

HSP 1 Score: 55.1 bits (131), Expect = 1.220e-6
Identity = 36/108 (33.33%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   21 RLGYDVIGLQETRR-SGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTSITRAARPPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            ++GYDVIGL ETRR    +A    G  ++  G C S     +G GGVG+ + T++       + ++ R+ ++ L   G   AVT+FV YAP  + +     AF+  L+
Sbjct:    5 KIGYDVIGLTETRRHQPLNATFDTGEELFL-GTCDS-----RGVGGVGVLVNTNLAINIDSFEQLTTRIGRLRLRRCGSMPAVTIFVAYAPTSSYDEEEIEAFYMDLE 106          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: W2T9B2_NECAM (Uncharacterized protein (Fragment) n=1 Tax=Necator americanus TaxID=51031 RepID=W2T9B2_NECAM)

HSP 1 Score: 52.4 bits (124), Expect = 1.030e-5
Identity = 35/108 (32.41%), Postives = 60/108 (55.56%), Query Frame = 0
Query:   21 RLGYDVIGLQETRRSGR-SAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTSITRAARPPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            ++ YDVIGL ETRR    +A  + G  ++  G C S     +G GGVG+ I+TS+T+     + ++ R+ ++ +   G   A+T+FV YAP  +       AF+ +++
Sbjct:   29 KIKYDVIGLTETRRRHPLNAVYETGEELFL-GTCDS-----RGVGGVGVLIKTSMTKNIDSFEQLTTRIGRLRMRRCGSTPALTIFVAYAPTSSYE-EEVDAFYMNME 129          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: A0A6S7JAH8_PARCT (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JAH8_PARCT)

HSP 1 Score: 52.0 bits (123), Expect = 2.070e-5
Identity = 38/110 (34.55%), Postives = 56/110 (50.91%), Query Frame = 0
Query:   21 RLGYDVIGLQETR--RSGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTS-ITRAARPPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            R   D+  L ETR    G+    +AGY+ + SG    E    + + GVG AI+   I +    PK ++DRL+ +TL+L+G+  A T+   YAP  T     K  F+  LD
Sbjct:   35 RYKVDIAALSETRFAEEGQLRELKAGYTFFWSGRGKDE----RRESGVGFAIKNDLIGKLTSLPKGVNDRLMTLTLQLKGKRYA-TIVSCYAPTMTNPDDIKDKFYEELD 139          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: A0A7D9EKZ5_PARCT (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EKZ5_PARCT)

HSP 1 Score: 52.0 bits (123), Expect = 3.460e-5
Identity = 38/110 (34.55%), Postives = 56/110 (50.91%), Query Frame = 0
Query:   21 RLGYDVIGLQETR--RSGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTS-ITRAARPPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            R   D+  L ETR    G+    +AGY+ + SG    E    + + GVG AI+   I +    PK ++DRL+ +TL+L+G+  A T+   YAP  T     K  F+  LD
Sbjct:   38 RYKVDIAALSETRFAEEGQLRELKAGYTFFWSGRGKDE----RRESGVGFAIKNDLIGKLTSLPKGVNDRLMTLTLQLKGKRYA-TIVSCYAPTMTNPDDIKDKFYEELD 142          
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Match: W2SH60_NECAM (Uncharacterized protein n=1 Tax=Necator americanus TaxID=51031 RepID=W2SH60_NECAM)

HSP 1 Score: 49.7 bits (117), Expect = 4.950e-5
Identity = 31/107 (28.97%), Postives = 51/107 (47.66%), Query Frame = 0
Query:   21 RLGYDVIGLQETRRSGRSAFNQAGYSVYCSGECGSENGGKKGQGGVGLAIRTSITRAARPPKFISDRLLKVTLELRGRAKAVTVFVVYAPNETQNASNKHAFWTSLD 127
            ++ YDVIGL ETRR              C          K+G GGVG+ + TS+ +     + ++ R+ ++ +   G   A+T+FV YAP  + +     AF+  L+
Sbjct:   26 KIKYDVIGLTETRRR------------TCD---------KRGVGGVGVLVNTSMAKNIDSFEELTTRIGRLRMRRCGPTPALTIFVTYAPTSSYDEEEVEAFYLDLE 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121081.1618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KDS6_9PHAE1.280e-1839.06Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE2.390e-1840.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLQ6_9PHAE4.020e-836.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0C2FEX7_9BILA1.220e-633.33Uncharacterized protein (Fragment) n=1 Tax=Ancylos... [more]
W2T9B2_NECAM1.030e-532.41Uncharacterized protein (Fragment) n=1 Tax=Necator... [more]
A0A6S7JAH8_PARCT2.070e-534.55Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7D9EKZ5_PARCT3.460e-534.55Endo/exonuclease/phosphatase domain-containing pro... [more]
W2SH60_NECAM4.950e-528.97Uncharacterized protein n=1 Tax=Necator americanus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 5..127
e-value: 2.2E-10
score: 42.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 16..126
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 24..94
e-value: 1.1E-5
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121081contigH-elongata_contig121081:1178..1558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121081.1618.1mRNA_H-elongata_contig121081.1618.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121081 1148..1558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121081.1618.1 ID=prot_H-elongata_contig121081.1618.1|Name=mRNA_H-elongata_contig121081.1618.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MAVDGKRGIGRALNGLNVYDRLGYDVIGLQETRRSGRSAFNQAGYSVYCS
GECGSENGGKKGQGGVGLAIRTSITRAARPPKFISDRLLKVTLELRGRAK
AVTVFVVYAPNETQNASNKHAFWTSLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase