prot_H-elongata_contig120850.1602.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120850.1602.1
Unique Nameprot_H-elongata_contig120850.1602.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: D7FM35_ECTSI (tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM35_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 7.860e-86
Identity = 124/148 (83.78%), Postives = 138/148 (93.24%), Query Frame = 0
Query:    1 MVEHTDAHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQWEYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            M++H++AHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEM VD TLLHQQDNL +FL H +++GP AVQLGGN+ D+LA AAEMCEQW + EINLNCGCPS+KV+DRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDD+D
Sbjct:    1 MMDHSNAHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMYVDKTLLHQQDNLHNFLSHRAAEGPLAVQLGGNDPDTLAEAAEMCEQWAFSEINLNCGCPSSKVSDRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDKD 148          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: A0A7S0DBX9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DBX9_9EUKA)

HSP 1 Score: 186 bits (473), Expect = 1.040e-53
Identity = 89/147 (60.54%), Postives = 110/147 (74.83%), Query Frame = 0
Query:    2 VEHTDAHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQWEYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            V+  D  R S+APMM  T+R+FRY  R +++ +KLYTEMLVD TL+HQ+DNL  FLG   S+ P   QLGG+  D LA AA MCE W YDEINLNCGCPS KV+ RCFGARLML P+ VR+IT+ M R+V + PVTVKCR+G D++D
Sbjct:  116 VKEIDHDRLSIAPMMQWTNRHFRYFLRLMTKHTKLYTEMLVDDTLIHQKDNLRRFLGFNPSEHPVVCQLGGSEPDKLAEAAAMCESWGYDEINLNCGCPSKKVSGRCFGARLMLKPDLVRQITHAMRRRV-QIPVTVKCRLGADNKD 261          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: A0A067CH99_SAPPC (Dus domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CH99_SAPPC)

HSP 1 Score: 181 bits (460), Expect = 1.650e-53
Identity = 87/141 (61.70%), Postives = 111/141 (78.72%), Query Frame = 0
Query:    9 RFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            R SVAPMM  TDR++R++ RQ++R++ LYTEM+VD TLLHQ+DNL +FLGH + + P A+QLGGN+ +SL   A M E +  + EINLN GCPS KV+ +CFGARLML+PE VR+I Y MIR+V  TP+TVKCRIGVDD D
Sbjct:    9 RLSVAPMMDWTDRHYRFMMRQITRKTLLYTEMVVDQTLLHQKDNLDYFLGHDNIEHPLALQLGGNDVESLGTVARMAETYGNFHEINLNVGCPSPKVSSQCFGARLMLNPELVRDICYEMIRQVASTPITVKCRIGVDDLD 149          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: T0RFX9_SAPDV (Dus domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0RFX9_SAPDV)

HSP 1 Score: 179 bits (454), Expect = 1.400e-52
Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 0
Query:    9 RFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            R SVAPMM  TDR++R++ RQ++R++ LYTEM+VD TLLHQ+DNL +FLGH   + P A+QLGGN+  SL   A M E +  + EINLN GCPS KV+ +CFGARLML+PE VR++ Y MIR+V  TP+TVKCRIGVDD D
Sbjct:   14 RLSVAPMMDWTDRHYRFMMRQITRKTLLYTEMVVDQTLLHQKDNLDYFLGHDDIEHPLALQLGGNDVKSLGTVARMAETYGNFHEINLNVGCPSPKVSSQCFGARLMLNPELVRDLCYEMIRQVASTPITVKCRIGVDDLD 154          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: A0A6G0XXM5_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXM5_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.320e-50
Identity = 83/141 (58.87%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    9 RFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            R SVAPMM  TDR++R++ RQ++R++ LYTEM+VD TL+HQ+ NL +FLGH +++ P A+QLGGN+ ++L   A+M   +  + EINLN GCPS KV+ RCFGARLMLDP  VR+I Y M R+VT TP+TVKCR+GVDD D
Sbjct:   14 RLSVAPMMDWTDRHYRFMMRQITRKTLLYTEMVVDETLMHQKHNLDYFLGHDAAEYPLALQLGGNDPETLGEVAKMAAAYGNFHEINLNVGCPSPKVSKRCFGARLMLDPILVRDICYEMRRQVTSTPITVKCRLGVDDFD 154          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: A0A024U4H1_9STRA (Dus domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4H1_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.730e-49
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 0
Query:    2 VEHTDAHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            +EH    R SVAPMM  TDR++RY+ R ++RR+ LYTEM+VD T++HQ+ NL +FLGH + + P A+Q+GG+N ++L   A+M E +  + EIN+N GCPS KV+  CFGARLML+P  VR+I Y M R+VT TP+TVKCR+GVDD D
Sbjct:    7 IEHAPT-RLSVAPMMDWTDRHYRYMMRLITRRTLLYTEMVVDETIMHQKHNLDYFLGHDAVEYPLALQVGGSNPETLGEVAKMAESYGRFHEININVGCPSPKVSRGCFGARLMLNPSLVRDICYEMRRQVTSTPITVKCRLGVDDFD 153          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: W4H8Y4_9STRA (Dus domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8Y4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.170e-49
Identity = 83/141 (58.87%), Postives = 107/141 (75.89%), Query Frame = 0
Query:    9 RFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            R SVAPMM  TDR++RY+ R ++RR+ LYTEM+VD+TL+HQ+ NL +FLGH S + P A+QLGG+N   L   A+M E +  + EIN+N GCPS KV+  CFGARLMLDP  VR+I + M R+VT TP+TVKCR+GVDD D
Sbjct:   13 RLSVAPMMDWTDRHYRYMMRLITRRTLLYTEMVVDATLMHQKHNLDYFLGHDSLEHPLALQLGGSNPAMLGEVAKMAESYGSFHEININVGCPSPKVSKNCFGARLMLDPAHVRDICHEMRRQVTSTPITVKCRLGVDDFD 153          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: A0A024U3Z1_9STRA (Dus domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3Z1_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.690e-48
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 0
Query:    2 VEHTDAHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            +EH    R SVAPMM  TDR++RY+ R ++RR+ LYTEM+VD T++HQ+ NL +FLGH + + P A+Q+GG+N ++L   A+M E +  + EIN+N GCPS KV+  CFGARLML+P  VR+I Y M R+VT TP+TVKCR+GVDD D
Sbjct:    7 IEHAPT-RLSVAPMMDWTDRHYRYMMRLITRRTLLYTEMVVDETIMHQKHNLDYFLGHDAVEYPLALQVGGSNPETLGEVAKMAESYGRFHEININVGCPSPKVSRGCFGARLMLNPSLVRDICYEMRRQVTSTPITVKCRLGVDDFD 153          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: A0A1V9ZQ72_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ72_9STRA)

HSP 1 Score: 167 bits (422), Expect = 8.560e-48
Identity = 77/141 (54.61%), Postives = 107/141 (75.89%), Query Frame = 0
Query:    9 RFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQW-EYDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRD 148
            R SVAPMM  TDR++R++ R +++++ LYTEM+VD TLLHQQ N  +FLGH   + P A+Q+GG++ ++L   A++   +  + EINLN GCPS +V+  CFGARLML+PE VR+I Y MIR+V+ TP+TVKCRIGVD+ D
Sbjct:    9 RLSVAPMMDWTDRHYRFMMRHITKKTLLYTEMVVDKTLLHQQQNFDYFLGHDDIEHPLALQIGGSDVETLGTVAKLASNYANFHEINLNVGCPSPRVSSGCFGARLMLNPELVRDICYEMIRQVSSTPITVKCRIGVDEND 149          
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Match: K3X2Z4_GLOUD (tRNA-dihydrouridine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Z4_GLOUD)

HSP 1 Score: 167 bits (422), Expect = 8.760e-48
Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 0
Query:    9 RFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQDNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQWE-YDEINLNCGCPSTKVADRCFGARLMLDPERVREITYGMIRKV---TRTP-VTVKCRIGVDDRD 148
            R S+APMM  TDR++RY+ R +++ + LYTEMLVD TL+HQQ NL +FLGH S + P A+QLGGNN + L   A++   +  + EINLN GCPS+ V+ RCFGARLML+PERVR+I   MIR V   T  P VTVKCRIGVDD D
Sbjct:   10 RLSIAPMMDWTDRHYRYMMRLITKNTLLYTEMLVDQTLMHQQKNLDYFLGHDSVEAPLALQLGGNNVEDLGAVAKLSNDYGGFCEINLNAGCPSSLVSSRCFGARLMLEPERVRDICSSMIRNVAPSTNVPDVTVKCRIGVDDHD 154          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120850.1602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM35_ECTSI7.860e-8683.78tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus Ta... [more]
A0A7S0DBX9_9EUKA1.040e-5360.54Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A067CH99_SAPPC1.650e-5361.70Dus domain-containing protein n=1 Tax=Saprolegnia ... [more]
T0RFX9_SAPDV1.400e-5260.99Dus domain-containing protein n=2 Tax=Saprolegniac... [more]
A0A6G0XXM5_9STRA3.320e-5058.87tRNA-dihydrouridine synthase n=1 Tax=Aphanomyces e... [more]
A0A024U4H1_9STRA1.730e-4955.41Dus domain-containing protein n=1 Tax=Aphanomyces ... [more]
W4H8Y4_9STRA3.170e-4958.87Dus domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A024U3Z1_9STRA1.690e-4855.41Dus domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A1V9ZQ72_9STRA8.560e-4854.61tRNA-dihydrouridine synthase n=1 Tax=Thraustotheca... [more]
K3X2Z4_GLOUD8.760e-4858.62tRNA-dihydrouridine synthase n=1 Tax=Globisporangi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 6..149
e-value: 1.8E-42
score: 147.5
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 12..147
e-value: 3.9E-37
score: 128.0
IPR004653tRNA-dihydrouridine(20/20a) synthasePANTHERPTHR42907FAMILY NOT NAMEDcoord: 3..148
NoneNo IPR availablePANTHERPTHR42907:SF1FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEINcoord: 3..148
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 8..148
IPR018517tRNA-dihydrouridine synthase, conserved sitePROSITEPS01136UPF0034coord: 93..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120850contigH-elongata_contig120850:208..1904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120850.1602.1mRNA_H-elongata_contig120850.1602.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120850 208..1904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120850.1602.1 ID=prot_H-elongata_contig120850.1602.1|Name=mRNA_H-elongata_contig120850.1602.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MVEHTDAHRFSVAPMMAVTDRYFRYLFRQLSRRSKLYTEMLVDSTLLHQQ
DNLWHFLGHCSSDGPTAVQLGGNNTDSLAVAAEMCEQWEYDEINLNCGCP
STKVADRCFGARLMLDPERVREITYGMIRKVTRTPVTVKCRIGVDDRDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
IPR004653DusA
IPR018517tRNA_hU_synthase_CS