prot_H-elongata_contig120739.1596.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120739.1596.1
Unique Nameprot_H-elongata_contig120739.1596.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig120739.1596.1 vs. uniprot
Match: A0A6H5JE22_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE22_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.800e-56
Identity = 93/140 (66.43%), Postives = 111/140 (79.29%), Query Frame = 0
Query:    1 MGDKSRRAIYDERMGDPTFQDRAERRR----GAQSAESRGQRWSRAGG-GSARMPPILRAFEFATHPRMLLVGVPLACVGYMVFGNHETEEPAAITKVDAWLNPATNQWETPAPWNEEFRKRRHLVQRVDRSIVRESARR 135
            MGDKS+RA+YDERM DP F+ R E R+    G + A   G R S A   G  RMPPILRAFEFATHPR+L+VG+PLACVGYM+FG+HE+E P +  KVDAWLNP+T +WETPAPW+EEFRKRRHLVQ+VDRSIV E+ +R
Sbjct:  107 MGDKSKRALYDERMADPAFRHRTEYRQRQGGGPEGAHRNGGRRSYAPPRGHTRMPPILRAFEFATHPRVLMVGIPLACVGYMIFGDHESEVPGSSVKVDAWLNPSTQRWETPAPWDEEFRKRRHLVQKVDRSIVHEAGKR 246          
BLAST of mRNA_H-elongata_contig120739.1596.1 vs. uniprot
Match: D7G772_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G772_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 9.890e-18
Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MGDKSRRAIYDERMGDPTFQDRAERRR---GAQSAESR--GQRWSRAGGGSARMPPILRAFEFATHPRMLLVGVPLACV 74
            MGDKS+RA+YDERM DP F+ R E R+   GA     R  G+R      G  RMPPILRAFE ATHPR+L+VG+PLACV
Sbjct:   60 MGDKSKRALYDERMADPAFRHRTEYRQRQGGAPGGAQRTGGRRSYAPPRGHTRMPPILRAFELATHPRVLMVGIPLACV 138          
BLAST of mRNA_H-elongata_contig120739.1596.1 vs. uniprot
Match: A0A4D9DC63_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC63_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.030e-7
Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0
Query:   40 SRAGGGSARMPPILRAF---EFATHPRMLLVGVPLACVGYMVFGNHETEEPAAITKVDAWLNPATNQWETPAPWNEEFR 115
            SR GG S+      RAF   E A  PR+L++G+ LA + Y+  G  E    ++   V AW N  T +WETPAPWN ++R
Sbjct:  107 SRKGGFSSS-----RAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDPGHSSDLLVPAWYNQRTKRWETPAPWNPDYR 180          
BLAST of mRNA_H-elongata_contig120739.1596.1 vs. uniprot
Match: A0A7S1E0B4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0B4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.690e-7
Identity = 29/88 (32.95%), Postives = 46/88 (52.27%), Query Frame = 0
Query:   50 PPILRAF-EFATHPRMLLVGVPLACVGYMVFGNHETEEPAAI-----TKVDAWLNPATNQWETPAPWNEEFRKRRHLVQRVDRSIVRE 131
            PP  + F +    PR LL+G      G  +F +   +E   I     +KV+AW NP + QWE PAPW+ E+++ +  +  V R  V++
Sbjct:   10 PPATQGFWDIFFRPRNLLIGATFGVFGGFLFRSFFRDERRHINLQGASKVEAWKNPKSGQWELPAPWDAEYKRLKPTLHFVPREKVQQ 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120739.1596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JE22_9PHAE1.800e-5666.43J domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D7G772_ECTSI9.890e-1859.49Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A4D9DC63_9STRA1.030e-741.77J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A7S1E0B4_9STRA5.690e-732.95Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120739contigH-elongata_contig120739:66..1962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120739.1596.1mRNA_H-elongata_contig120739.1596.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120739 63..1962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120739.1596.1 ID=prot_H-elongata_contig120739.1596.1|Name=mRNA_H-elongata_contig120739.1596.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MGDKSRRAIYDERMGDPTFQDRAERRRGAQSAESRGQRWSRAGGGSARMP
PILRAFEFATHPRMLLVGVPLACVGYMVFGNHETEEPAAITKVDAWLNPA
TNQWETPAPWNEEFRKRRHLVQRVDRSIVRESARR*
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