prot_H-elongata_contig12071.1592.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12071.1592.1 vs. uniprot
Match: D7FM12_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM12_ECTSI) HSP 1 Score: 177 bits (448), Expect = 6.720e-47 Identity = 136/333 (40.84%), Postives = 163/333 (48.95%), Query Frame = 0
Query: 1 MTRVTARSLRVLAKKESLRWVNLRCCTIGGNDAL--RTMKKLRRCMSSPKLPRDRGIVLGLERPGSQPGSRGSLRRLDSTGVSPGFGGGRSPREYRARRNYSFPGNEG-GRRAGDISAGDERDTAYLAVEREASTDVRVSHPSSGTNSSAVYSAVPSPFSSSSASAREQEVKRSSSSERVPFRLPVGMGDLSLGK---------------------------QPSSRTAGTPQRLGGS----EEEVVAFDWDAVPRGRGLGDLSMWKGFRGLSGDLVKHILCELHPFANVNFVGRRSGLMNP-SRKNNHGYLVHTSKHALSWVEIEVDKQGCV 298
+TRVT RSLR+LA K+SLRWVN+RCC+ GNDA+ + + R +S PK PRDRG VLG+ERP Q S R S G S R + + G G GRR I + + V EAS ++ AV S P + AS+R+ + LP G+GDLSLG+ Q R + G EE VV FDWD VPRG G+G L WKGFRGLSGDLVK+I+ ELHP A V F L P SRKN HGYLVHTSK +WVE EVD QGCV
Sbjct: 394 LTRVTERSLRLLAMKDSLRWVNVRCCSGIGNDAVTAKILANFRSRLSPPKHPRDRGTVLGMERPEPQ-----SRTRAPSCSRRKPLGANSSGRSEDSSGCGGYQGERGKGRREAAIR---QEGNGHELVAEEASAIQ-----ATAAEEEAVPSLAGEP---AGASSRDHPPRP----XXXXXLLPAGVGDLSLGRHRRRGXXXXXXXREGTXXXXXXXXXXXQDGGRGFAKGRGXXGERRVEEEAVVPFDWDTVPRGSGVGVLGSWKGFRGLSGDLVKNIIRELHPHAQVEFRPESDFLFGPHSRKNTHGYLVHTSKFGQAWVEFEVDGQGCV 706
BLAST of mRNA_H-elongata_contig12071.1592.1 vs. uniprot
Match: A0A6H5KWK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK9_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.050e-18 Identity = 64/145 (44.14%), Postives = 75/145 (51.72%), Query Frame = 0
Query: 172 SSSERVPFRLPVGMGDLSLGKQ---------PSSR-------TAGTPQRLGG---------------SEEEVVAFDWDAVPRGRGLGDLSMWKGFRGLSGDLVKHILCELHPFANVNFVGRRSGLMNP-SRKNNHGYLVHTSKHA 284
SS + P LP G+GDLSLG+ PSS + GT + GG E VV FDWD VPRG G+G L WKGFRGLSGDLVK+++ ELHP A V F + P SR N HGYLV S+ A
Sbjct: 442 SSRDHPPPLLPTGVGDLSLGRHRRHGESRGSPSSEGTKRGEGSTGTGFQDGGRGVAKGRGGGGDRRVEGEVVVPFDWDTVPRGSGVGVLGSWKGFRGLSGDLVKNVIRELHPHAQVEFRPGYDVVFGPHSRTNTHGYLVAKSRAA 586 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12071.1592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig12071.1592.1 ID=prot_H-elongata_contig12071.1592.1|Name=mRNA_H-elongata_contig12071.1592.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bpback to top |