prot_H-elongata_contig120572.1578.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120572.1578.1
Unique Nameprot_H-elongata_contig120572.1578.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.550e-46
Identity = 75/90 (83.33%), Postives = 82/90 (91.11%), Query Frame = 0
Query:    1 GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            GRDVHE   LAHYA+ACTDITF+FPFG+SELQGVAARG YDLTQHQEASGK MEYFDE TK ++VPHVIEPSLGVDRLFLA++ SAYHED
Sbjct:  292 GRDVHEAHKLAHYARACTDITFRFPFGQSELQGVAARGAYDLTQHQEASGKGMEYFDEATKRKYVPHVIEPSLGVDRLFLALLTSAYHED 381          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 5.640e-43
Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            G +VH D  LAHYA+ACTDITFKFPFGESELQG+AARGCYDLTQHQE SGKS+EY  E TK++F+PHVIEPSLGVDRL LA++ SAYH+D
Sbjct:  292 GTEVHADDKLAHYARACTDITFKFPFGESELQGIAARGCYDLTQHQEGSGKSLEYQVEGTKDKFLPHVIEPSLGVDRLLLALICSAYHKD 381          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A7R9YDS6_9STRA (Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDS6_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.080e-42
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            G+DVHED  LAHYA+ACTDITFKFPFGESELQG+AARG YDL  HQ +SGKS EYFDE  K ++VPHVIEPS+GV+RLFLA++ SAYHED
Sbjct:  327 GKDVHEDCDLAHYARACTDITFKFPFGESELQGIAARGDYDLNAHQGSSGKSQEYFDEANKRKYVPHVIEPSIGVERLFLALVCSAYHED 416          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: W7TM99_9STRA (Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM99_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.750e-41
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    1 GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            GRDVH  G LAHYAKACTDI F+FPFG+ ELQG+AARG YDLTQHQ +SGKSMEYFDE  K R+VPHVIEPS+GVDRLFLA++ SAY ED
Sbjct:  379 GRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAED 468          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A7S3AL73_9EUKA (Glycine--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AL73_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 7.900e-41
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    3 DVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            DVH    LAHYA+ACTDI FKFPFG  ELQGVAARGC+DLTQH  ASGKSMEY+D+  KE++VPHVIEPS+GVDRL LA++ SAY ED
Sbjct:   42 DVHPSHKLAHYARACTDIMFKFPFGTQELQGVAARGCFDLTQHAGASGKSMEYYDDVRKEKYVPHVIEPSIGVDRLMLAVLCSAYKED 129          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A7R9WRX3_9STRA (Glycine--tRNA ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRX3_9STRA)

HSP 1 Score: 144 bits (363), Expect = 8.900e-41
Identity = 63/90 (70.00%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    1 GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            G DVHE  SLAHYA+ACTD+TF+FPFGE EL G+AARG +DLTQH E SGKS+++FD++TKE+++PH IEPSLGVDRL LA++ SAY ED
Sbjct:   83 GWDVHEGDSLAHYARACTDVTFRFPFGEQELMGIAARGNFDLTQHSEGSGKSLDFFDDQTKEKYIPHCIEPSLGVDRLMLALICSAYAED 172          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A1J4XFE5_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacterium CG1_02_43_26 TaxID=1805421 RepID=A0A1J4XFE5_9BACT)

HSP 1 Score: 147 bits (372), Expect = 2.610e-40
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0
Query:    2 RDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            ++VH    LAHYAKACTDI F+FPFG+ ELQG+AARG YDL QHQE SGKS+EYFDE TKER+VPHVIEPS+GVDRLFLA+M SAY ED
Sbjct:  301 KEVHSVDKLAHYAKACTDIVFQFPFGKQELQGIAARGNYDLMQHQEHSGKSLEYFDEITKERYVPHVIEPSIGVDRLFLALMCSAYQED 389          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A7S0CDM5_9STRA (Glycine--tRNA ligase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDM5_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.800e-40
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    2 RDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            RD+H    LAHYA+ACTDI F+FPFG  EL G+AARG YDLTQH E SGK+++YFDE TKER++PHVIEPSLGVDRL LA++ SAY ED
Sbjct:  104 RDIHLGDGLAHYARACTDIEFRFPFGTQELMGIAARGNYDLTQHSEGSGKTLDYFDEVTKERYIPHVIEPSLGVDRLVLALICSAYRED 192          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A1G3Z6K9_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacterium GWC2_42_7 TaxID=1802430 RepID=A0A1G3Z6K9_9BACT)

HSP 1 Score: 147 bits (371), Expect = 3.600e-40
Identity = 64/90 (71.11%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    1 GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            G DVH    LAHY++ACTDITFK+PFG  EL+G+AARGC+DLTQHQEASGKS+EYFDE  K +++PHVIEP++GVDR+FLAI+ SAY ED
Sbjct:  300 GLDVHPKNKLAHYSRACTDITFKYPFGVQELEGIAARGCFDLTQHQEASGKSLEYFDEEKKAKYLPHVIEPAVGVDRIFLAILCSAYDED 389          
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Match: A0A1E7FJG2_9STRA (Glycine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJG2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.520e-39
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    3 DVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASGKSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED 90
            DVHE   LAHYA+ACTDITFKFPFG  EL G+AARG YDLTQH E SGKS+EY+DE TKE+++PH IEPSLGVDRL LA++ SAY ED
Sbjct:  260 DVHEGNKLAHYARACTDITFKFPFGTQELMGIAARGNYDLTQHTEGSGKSLEYYDEETKEKYIPHCIEPSLGVDRLLLAVICSAYAED 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120572.1578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRJ7_9STRA1.550e-4683.33Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A6U1N9R4_9STRA5.640e-4377.78Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YDS6_9STRA4.080e-4276.67Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TM99_9STRA1.750e-4177.78Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S3AL73_9EUKA7.900e-4173.86Glycine--tRNA ligase n=1 Tax=Haptolina ericina Tax... [more]
A0A7R9WRX3_9STRA8.900e-4170.00Glycine--tRNA ligase n=1 Tax=Craspedostauros austr... [more]
A0A1J4XFE5_9BACT2.610e-4076.40Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacte... [more]
A0A7S0CDM5_9STRA2.800e-4070.79Glycine--tRNA ligase (Fragment) n=1 Tax=Proboscia ... [more]
A0A1G3Z6K9_9BACT3.600e-4071.11Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacte... [more]
A0A1E7FJG2_9STRA1.520e-3973.86Glycine--tRNA ligase n=1 Tax=Fragilariopsis cylind... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 2..90
e-value: 6.2E-36
score: 126.0
NoneNo IPR availablePANTHERPTHR10745:SF19coord: 5..90
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 9..88
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 5..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120572contigH-elongata_contig120572:830..1999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120572.1578.1mRNA_H-elongata_contig120572.1578.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120572 830..1999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120572.1578.1 ID=prot_H-elongata_contig120572.1578.1|Name=mRNA_H-elongata_contig120572.1578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
GRDVHEDGSLAHYAKACTDITFKFPFGESELQGVAARGCYDLTQHQEASG
KSMEYFDERTKERFVPHVIEPSLGVDRLFLAIMVSAYHED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027031Gly-tRNA_synthase/POLG2