prot_H-elongata_contig120383.1571.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120383.1571.1
Unique Nameprot_H-elongata_contig120383.1571.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.190e-48
Identity = 90/108 (83.33%), Postives = 93/108 (86.11%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVS---IACFLD-RGF 104
            MASL DYEGGEE FWKTNGLLRRGDLIGVTGY GKSKKGELSVFPT+M LL+PCLHMLPN + GL NQETRYRQRYLDLMTNDETRRVFQVRS     I  FLD RGF
Sbjct:  143 MASLSDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTMVLLSPCLHMLPNSREGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGF 250          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A835Z3J2_9STRA (Lysine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.510e-35
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSV---SIACFL-DRGF 104
            M+SLGDYE  EE FW+ + LLRRGD++GVTG  GKSKKGELS+FPT + LL+PCLHMLP    GL NQE RYRQRYLDL+ ND+ RRVF+VRS     I  FL +RGF
Sbjct:  145 MSSLGDYES-EEAFWEVHDLLRRGDIVGVTGSPGKSKKGELSIFPTRITLLSPCLHMLPKGHSGLKNQEVRYRQRYLDLIMNDDVRRVFEVRSKVVDGIRTFLNERGF 251          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A5S6R4K0_TRIMR (Lysine--tRNA ligase n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6R4K0_TRIMR)

HSP 1 Score: 127 bits (319), Expect = 5.500e-32
Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFLDRGFD 105
            MA+  +YE GEEEF + N  +RRGD+IG  GY  ++KKGELS+ P  MQLL PCLHMLP+L  GL NQETRYR RYLDLM ND  R++F VR   I  +L + FD
Sbjct:  230 MANAKNYEAGEEEFLRVNETIRRGDIIGCIGYPSRTKKGELSIVPKEMQLLTPCLHMLPHLHYGLKNQETRYRMRYLDLMINDHVRQIF-VRRAQIVNYLRKYFD 333          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A7S2W8Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W8Y3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.210e-31
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKG-----GLMNQETRYRQRYLDLMTNDETRRVFQVRS 93
            M+ L  Y GGEEEF+K +  ++RGD+IGV G  GKS+KGELS+FP+ + LL+PCLHMLP  KG     G+ N ETRYRQRYLDL+ N E R+ F++R+
Sbjct:    2 MSDLKTYAGGEEEFFKIHRTIKRGDVIGVKGLPGKSRKGELSLFPSEIILLSPCLHMLPFAKGDSAQGGITNMETRYRQRYLDLIVNQENRKTFEIRA 99          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: W4G6B8_9STRA (Lysyl-tRNA synthetase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6B8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.060e-31
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    6 DYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFLDRGFD 105
            D    E E+ + +  LRRGDL+GVTG+ GKSKKGELS+FPTS+ LL+PC+HMLP    GL NQ+TR+RQRYLDL+ NDETR+VF VRS  I  F+ +  D
Sbjct:  169 DVYADEAEYARIHAALRRGDLVGVTGFPGKSKKGELSIFPTSLVLLSPCMHMLPKAHYGLSNQDTRFRQRYLDLILNDETRKVFTVRS-KIVNFIRKFLD 267          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A812SXT5_SYMMI (Lysyl-tRNA synthetase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SXT5_SYMMI)

HSP 1 Score: 124 bits (312), Expect = 2.740e-31
Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFLDRGFD 105
            M+ +  ++G EEEF  T+ L++RGD++GV G+ GKSKKGELS+FP  M+LL+PC+HMLP  + GL NQE RYRQRYLDL+ + +TRRVF+ R+  I  ++ R  D
Sbjct:  107 MSDVSTFDGTEEEFRDTHNLIKRGDIVGVVGFPGKSKKGELSIFPRRMKLLSPCMHMLPTSRSGLKNQEVRYRQRYLDLILSSDTRRVFETRA-KIINYIRRYLD 210          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A4D9D097_9STRA (AA_TRNA_LIGASE_II domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D097_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.440e-31
Identity = 63/105 (60.00%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFLDRGFD 105
            M     Y  GEE F++ NG LRRGD++GVTG+ GKSKKGELSVF   + LL+PCL +LP    GL NQE RYRQRYLDL+ N ETRRVFQVR+  I  F+ R  D
Sbjct:    1 MTDPKSYAAGEEAFYRVNGYLRRGDIVGVTGHPGKSKKGELSVFAKELTLLSPCLQLLPKGYTGLKNQEVRYRQRYLDLILNSETRRVFQVRA-RIINFIRRFLD 104          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A6A4Z9U5_9STRA (Lysyl-tRNA synthetase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9U5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.750e-31
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    6 DYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFLDRGFD 105
            D    E E+ + +  LRRGDL+GVTG+ GKSKKGELS+FPTS+ LL+PC+HMLP    GL NQ+TR+RQRYLDL+ NDETR+VF VRS  I  F+ +  D
Sbjct:    5 DVYANEAEYARIHAALRRGDLVGVTGFPGKSKKGELSIFPTSLVLLSPCMHMLPKAHYGLSNQDTRFRQRYLDLILNDETRKVFTVRS-KIVNFIRKFLD 103          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A077Z2Z4_TRITR (Lysine--tRNA ligase n=3 Tax=Trichuris TaxID=36086 RepID=A0A077Z2Z4_TRITR)

HSP 1 Score: 123 bits (309), Expect = 9.430e-31
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFLDRGFD 105
            MA+  +Y  GEEEF + N  +RRGD++G  GY  ++KKGELS+ P  MQLL PCLHMLP+L  GL NQETRYR RYLDLM ND  R++F VR   I  +L + FD
Sbjct:  144 MANAKNYAAGEEEFLRINDNIRRGDILGCVGYPSRTKKGELSIVPKEMQLLTPCLHMLPHLHYGLKNQETRYRMRYLDLMINDNVRQIF-VRRAQIINYLRKYFD 247          
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Match: A0A8K1CEE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEE6_PYTOL)

HSP 1 Score: 122 bits (307), Expect = 2.370e-30
Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    1 MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQLLAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRS 93
            M+S  +YE  E+ F+K + +LRRGD++GV GY GKSKKGELS+FPT + LL+PC+HMLP    GL  Q+TRYRQRYLDL+ NDETR VFQ R+
Sbjct:  152 MSSADNYES-EDAFFKIHSVLRRGDIVGVKGYPGKSKKGELSIFPTELVLLSPCMHMLPKAHYGLKLQDTRYRQRYLDLILNDETRNVFQTRA 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120383.1571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM77_ECTSI1.190e-4883.33Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z3J2_9STRA1.510e-3565.74Lysine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A5S6R4K0_TRIMR5.500e-3259.05Lysine--tRNA ligase n=1 Tax=Trichuris muris TaxID=... [more]
A0A7S2W8Y3_9STRA1.210e-3157.14Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
W4G6B8_9STRA2.060e-3160.00Lysyl-tRNA synthetase n=1 Tax=Aphanomyces astaci T... [more]
A0A812SXT5_SYMMI2.740e-3154.29Lysyl-tRNA synthetase (Fragment) n=1 Tax=Symbiodin... [more]
A0A4D9D097_9STRA5.440e-3160.00AA_TRNA_LIGASE_II domain-containing protein n=4 Ta... [more]
A0A6A4Z9U5_9STRA8.750e-3160.00Lysyl-tRNA synthetase n=1 Tax=Aphanomyces astaci T... [more]
A0A077Z2Z4_TRITR9.430e-3157.14Lysine--tRNA ligase n=3 Tax=Trichuris TaxID=36086 ... [more]
A0A8K1CEE6_PYTOL2.370e-3062.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 63..104
e-value: 1.4E-5
score: 26.3
NoneNo IPR availableGENE3D2.40.50.140coord: 1..60
e-value: 5.3E-18
score: 67.2
NoneNo IPR availablePANTHERPTHR42918FAMILY NOT NAMEDcoord: 1..97
NoneNo IPR availablePANTHERPTHR42918:SF3LYSINE--TRNA LIGASEcoord: 1..97
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 10..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120383contigH-elongata_contig120383:790..1937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120383.1571.1mRNA_H-elongata_contig120383.1571.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120383 48..1937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120383.1571.1 ID=prot_H-elongata_contig120383.1571.1|Name=mRNA_H-elongata_contig120383.1571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MASLGDYEGGEEEFWKTNGLLRRGDLIGVTGYAGKSKKGELSVFPTSMQL
LAPCLHMLPNLKGGLMNQETRYRQRYLDLMTNDETRRVFQVRSVSIACFL
DRGFDC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold