prot_H-elongata_contig120202.1559.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120202.1559.1
Unique Nameprot_H-elongata_contig120202.1559.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: A0A6H5KG45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG45_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 4.280e-43
Identity = 80/104 (76.92%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAECFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQACKGRRRK 106
            +EVDVVFEEDVGFLGALRDLRR AKCPV+LTAE +R+++A LSC I ++P+PRL ELEACLTAVAAAE L+VS  ALRALA++H+GDLRACL TLQACKGRRR+
Sbjct:  113 EEVDVVFEEDVGFLGALRDLRRAAKCPVILTAETYRREYAPLSCNIWHLPRPRLAELEACLTAVAAAERLDVSLGALRALAQYHMGDLRACLFTLQACKGRRRQ 216          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 4.320e-43
Identity = 80/104 (76.92%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAECFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQACKGRRRK 106
            +EVDVVFEEDVGFLGALRDLRR AKCPV+LTAE +R+++A LSC I ++P+PRL ELEACLTAVAAAE L+VS  ALRALA++H+GDLRACL TLQACKGRRR+
Sbjct: 1025 EEVDVVFEEDVGFLGALRDLRRAAKCPVILTAETYRREYAPLSCNIWHLPRPRLAELEACLTAVAAAERLDVSLGALRALAQYHMGDLRACLFTLQACKGRRRQ 1128          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: A0A7S0HMQ2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HMQ2_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 3.110e-9
Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    4 EVDVVFEEDVGFLGALRDLRRGAKCPVVLTAECFRQDF---AQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            EVDVVF++DVGF  AL  L R +KCP+VLT     ++    A L  + L   +P L  L   L+A+    G+ +S   +R L +++  DLR  L TLQ
Sbjct:   22 EVDVVFDDDVGFYAALLKLARQSKCPIVLTCHAVPRELRRNAALVQQCLPWSRPVLPPLAGYLSAICMVRGVRISEHEIRLLCEYYACDLRKLLHTLQ 119          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: A0A0K9P3W6_ZOSMR (AAA domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P3W6_ZOSMR)

HSP 1 Score: 62.0 bits (149), Expect = 6.000e-9
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAECFRQDFAQ-LSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQA-CKGRR 104
            ++VD +F+ED GF+GA+  L   +K P++LTA C      Q L  E++    P   E+  CLT +  AEG+ +S+L L+     +  D+R  ++ LQ  C+G R
Sbjct:  568 EDVDTIFDEDRGFIGAILQLAETSKRPIILTANCREPVLPQVLEKEVVEFSLPSYDEILPCLTKICTAEGVLISSLLLKKSIVLNQADIRKTIMQLQFWCQGNR 671          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: UPI000F60106B (ATPase family AAA domain-containing protein 5 isoform X3 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI000F60106B)

HSP 1 Score: 61.2 bits (147), Expect = 1.060e-8
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAE--CFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            +EVDV+F+EDVGFL A++      K PVVLT     FR+ F+    EI++ P P  V++   L  VA AE + +    +R L +   GD+R CLL LQ
Sbjct:  451 EEVDVIFDEDVGFLAAIKTFMTTTKRPVVLTTNDPSFRERFSCSLEEIIFKP-PSAVDVCTYLQLVALAENVRLELDDVRGLLRLSGGDVRRCLLQLQ 547          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: UPI000F5DF894 (ATPase family AAA domain-containing protein 5 isoform X1 n=3 Tax=Larimichthys crocea TaxID=215358 RepID=UPI000F5DF894)

HSP 1 Score: 61.2 bits (147), Expect = 1.080e-8
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAE--CFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            +EVDV+F+EDVGFL A++      K PVVLT     FR+ F+    EI++ P P  V++   L  VA AE + +    +R L +   GD+R CLL LQ
Sbjct:  451 EEVDVIFDEDVGFLAAIKTFMTTTKRPVVLTTNDPSFRERFSCSLEEIIFKP-PSAVDVCTYLQLVALAENVRLELDDVRGLLRLSGGDVRRCLLQLQ 547          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: A0A4U5U2R0_COLLU (ATPase family AAA domain-containing protein 5 n=5 Tax=Sciaenidae TaxID=30870 RepID=A0A4U5U2R0_COLLU)

HSP 1 Score: 59.7 bits (143), Expect = 3.820e-8
Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAE--CFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            +EVDV+F+EDVGFL A++      K PVVLT     FR+ F+    EI++ P P  V++   L  VA AE + +    +R L     GD+R CLL LQ
Sbjct:  472 EEVDVIFDEDVGFLAAVKTFMTTTKRPVVLTTNDPSFRERFSCSLEEIIFKP-PSAVDVCTYLQLVALAENVRLDLDDVRGLVGLSGGDVRRCLLQLQ 568          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: UPI00094E5D85 (ATPase family AAA domain-containing protein 5-like isoform X1 n=3 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E5D85)

HSP 1 Score: 58.5 bits (140), Expect = 9.680e-8
Identity = 40/98 (40.82%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAE--CFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            +EVDV+FEEDVGFL A++      K PVVLT     FR+ F+  S E +    P  V + + L  +  AEG+ +    +R+L     GD+R CLL LQ
Sbjct:  438 EEVDVIFEEDVGFLAAVKTFMMTTKRPVVLTTNDSTFRERFSS-SLEEVVFKTPSAVNVCSYLQLLCLAEGVKMEIDDVRSLITLARGDVRRCLLQLQ 534          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: UPI00097E00C8 (ATPase family AAA domain-containing protein 5-like isoform X1 n=3 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097E00C8)

HSP 1 Score: 57.8 bits (138), Expect = 1.820e-7
Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAE--CFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            +EVDV+F++DVGFLGA++      K PV+LT     FR+ F+    EIL+   P +V + + L  V  +E + +    +R L +   GD+R CLL LQ
Sbjct:  537 EEVDVIFDDDVGFLGAIKSFMATTKRPVILTTNDPLFRERFSCSLEEILFKT-PSVVNVCSYLQLVCLSENVRLEQDDVRRLLRHTCGDVRRCLLQLQ 633          
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Match: A0A671UQK2_SPAAU (ATPase family AAA domain-containing protein 5-like n=2 Tax=Sparus aurata TaxID=8175 RepID=A0A671UQK2_SPAAU)

HSP 1 Score: 57.0 bits (136), Expect = 3.390e-7
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    3 QEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAE--CFRQDFAQLSCEILYMPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQ 98
            +EVDV+F+ DVGFL A++   +  K PVVLT     FR+ F+    EI++   P  V + + L  VA AE + +    +  L +   GD+R CLL LQ
Sbjct:  530 EEVDVIFDADVGFLSAIKTFMKTTKRPVVLTTNDPTFREKFSCSLVEIIFKT-PSAVNVCSYLQLVALAENVRLELEDVSGLLRLSRGDVRRCLLQLQ 626          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120202.1559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG45_9PHAE4.280e-4376.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH97_ECTSI4.320e-4376.92Similar to chromosome fragility associated gene 1 ... [more]
A0A7S0HMQ2_9EUKA3.110e-939.80Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A0K9P3W6_ZOSMR6.000e-935.58AAA domain-containing protein n=1 Tax=Zostera mari... [more]
UPI000F60106B1.060e-841.84ATPase family AAA domain-containing protein 5 isof... [more]
UPI000F5DF8941.080e-841.84ATPase family AAA domain-containing protein 5 isof... [more]
A0A4U5U2R0_COLLU3.820e-841.84ATPase family AAA domain-containing protein 5 n=5 ... [more]
UPI00094E5D859.680e-840.82ATPase family AAA domain-containing protein 5-like... [more]
UPI00097E00C81.820e-738.78ATPase family AAA domain-containing protein 5-like... [more]
A0A671UQK2_SPAAU3.390e-738.78ATPase family AAA domain-containing protein 5-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.60coord: 58..106
e-value: 5.3E-7
score: 31.1
NoneNo IPR availablePANTHERPTHR23389:SF21ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 5coord: 4..98
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 4..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120202contigH-elongata_contig120202:28..1852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120202.1559.1mRNA_H-elongata_contig120202.1559.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120202 28..1852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120202.1559.1 ID=prot_H-elongata_contig120202.1559.1|Name=mRNA_H-elongata_contig120202.1559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
LPQEVDVVFEEDVGFLGALRDLRRGAKCPVVLTAECFRQDFAQLSCEILY
MPKPRLVELEACLTAVAAAEGLNVSALALRALAKFHLGDLRACLLTLQAC
KGRRRK
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