prot_H-elongata_contig119927.1539.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119927.1539.1
Unique Nameprot_H-elongata_contig119927.1539.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
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BLAST of mRNA_H-elongata_contig119927.1539.1 vs. uniprot
Match: A0A6H5JDV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDV4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.620e-14
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0 
Query:   68 HGVDHGGGVYSKPGRKGPRVRGSHVGPGTFGCGRLGLLFTAFRFLHRRIIRRGRHGNNHNSSGRQ 132
            HGVDHG           PR+RGSHVGPGTFGCGRLG+LF AFRFL R++ ++ + GN HN+  RQ
Sbjct:   84 HGVDHGXXXXXXXXXXXPRMRGSHVGPGTFGCGRLGMLFMAFRFLQRKVGKKNKKGN-HNNXXRQ 147
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BLAST of mRNA_H-elongata_contig119927.1539.1 vs. uniprot
Match: D7FM21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM21_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 3.230e-8
Identity = 24/30 (80.00%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:   87 VRGSHVGPGTFGCGRLGLLFTAFRFLHRRI 116
            +RGSHVGPGTFGCGRLG+LF AFRFL R++
Sbjct:    1 MRGSHVGPGTFGCGRLGMLFMAFRFLQRKV 30
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119927.1539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDV4_9PHAE1.620e-1458.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM21_ECTSI3.230e-880.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119927contigH-elongata_contig119927:245..658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119927.1539.1mRNA_H-elongata_contig119927.1539.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119927 245..658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119927.1539.1 ID=prot_H-elongata_contig119927.1539.1|Name=mRNA_H-elongata_contig119927.1539.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
QQHQQLQQHQQQQQQQRRQQNKGREGGKGSGRGGGRVTGGRGRGRGGRRG
GGGGRGRGTGNGGRNARHGVDHGGGVYSKPGRKGPRVRGSHVGPGTFGCG
RLGLLFTAFRFLHRRIIRRGRHGNNHNSSGRQGWSEE*
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