prot_H-elongata_contig119887.1537.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119887.1537.1
Unique Nameprot_H-elongata_contig119887.1537.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.290e-44
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
Query:    2 NSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT 85
            NSLQSHY+GALLRQLYKIVGSFDFLGDPVGVLSQLG GVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT
Sbjct: 7270 NSLQSHYIGALLRQLYKIVGSFDFLGDPVGVLSQLGAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT 7353          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: A0A6H5KKT6_9PHAE (VPS13_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT6_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.250e-39
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    2 NSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT 85
            NSLQSHY+GALLRQLYKIVGSFDFLGDPVG    LG GVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTT IT
Sbjct:  531 NSLQSHYIGALLRQLYKIVGSFDFLGDPVG----LGAGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTNIT 610          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: L1IXT3_GUITC (VPS13_C domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IXT3_GUITC)

HSP 1 Score: 107 bits (266), Expect = 1.480e-25
Identity = 51/95 (53.68%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    2 NSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITCVLPDAMLVLS 96
            +S++ HY   L++QLYK+VGSF+FLG+PVG+++ LGTGV+DFFYEPA+G+MKSP  F KG+ KG++SL  N+T GV    +KIT  +  +++ LS
Sbjct:   77 SSIRKHYRTQLIQQLYKLVGSFEFLGNPVGLVNNLGTGVQDFFYEPAQGMMKSPAEFAKGMQKGSLSLFKNSTYGVFNAASKITSSMSKSLVQLS 171          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: A0A7S4JFQ1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JFQ1_GUITH)

HSP 1 Score: 107 bits (266), Expect = 6.330e-25
Identity = 51/95 (53.68%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    2 NSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITCVLPDAMLVLS 96
            +S++ HY   L++QLYK+VGSF+FLG+PVG+++ LGTGV+DFFYEPA+G+MKSP  F KG+ KG++SL  N+T GV    +KIT  +  +++ LS
Sbjct: 1316 SSIRKHYRTQLIQQLYKLVGSFEFLGNPVGLVNNLGTGVQDFFYEPAQGMMKSPAEFAKGMQKGSLSLFKNSTYGVFNAASKITSSMSKSLVQLS 1410          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: A0A7S0HSC2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HSC2_9CRYP)

HSP 1 Score: 106 bits (265), Expect = 8.550e-25
Identity = 51/95 (53.68%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    2 NSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITCVLPDAMLVLS 96
            +S++ HY   L++QLYK+VGSF+FLG+PVG+++ LGTGV+DFFYEPA+G+MKSP  F KG+ KG++SL  N+T GV    +KIT  +  +++ LS
Sbjct:  911 SSIRKHYRTQLIQQLYKLVGSFEFLGNPVGLVNNLGTGVQDFFYEPAQGMMKSPAEFAKGMHKGSLSLFKNSTYGVFNAASKITSSMSKSLVQLS 1005          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: A0A7S0QEK5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEK5_9CRYP)

HSP 1 Score: 99.8 bits (247), Expect = 1.740e-24
Identity = 46/83 (55.42%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    3 SLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT 85
            S+++HY   L++QLYK+VGSF+FLG+PVG+++ LGTGV DFFYEPA+G+ KSP  F KGV+KG+ SL+ ++T G +   +K+T
Sbjct:   82 SIRNHYRTQLIQQLYKLVGSFEFLGNPVGLVNNLGTGVHDFFYEPAQGITKSPAEFLKGVSKGSSSLLSHSTYGFMNAASKVT 164          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: A0A7S0XUQ8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XUQ8_HEMAN)

HSP 1 Score: 102 bits (253), Expect = 4.870e-24
Identity = 48/85 (56.47%), Postives = 66/85 (77.65%), Query Frame = 0
Query:    1 MNSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT 85
            ++S++ HY   LL QLYK++G+F+FLG+PVG+++ LGTGV DFFYEPA+G+ KSP  F KGV+KG+MSL+ N   GV    +KIT
Sbjct:  238 VSSIRKHYKTQLLHQLYKLIGAFEFLGNPVGLVNNLGTGVHDFFYEPAQGITKSPGEFAKGVSKGSMSLLRNINYGVFNGVSKIT 322          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: W7TRD9_9STRA (Vacuolar protein sorting-associated protein 13 family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRD9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.280e-22
Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    3 SLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKI 84
            +LQ+HY    L Q Y+IVGS D +G+P+   S LGTGV DFFYEPA+GL+KSP AF +GV KGT SLV NTTSG LG   KI
Sbjct: 4749 TLQAHYTSNFLFQFYRIVGSIDIIGNPLSFASSLGTGVIDFFYEPAQGLVKSPRAFVRGVVKGTSSLVTNTTSGFLGVAGKI 4830          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: UPI001D05367F (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D05367F)

HSP 1 Score: 93.2 bits (230), Expect = 2.440e-21
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    1 MNSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKIT 85
            M+ ++ HY+     Q YKI+GS D +G+P+G+ S +GTGV DFFYEPA  + KSP  F  G+AKG+MSL+ N+  G+  FT+K+T
Sbjct:   82 MDKIKKHYIRQATVQFYKILGSLDIIGNPIGLFSDIGTGVVDFFYEPASAITKSPEEFASGLAKGSMSLLKNSVHGIGNFTSKLT 166          
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Match: A0A7S4L3E8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L3E8_9EUKA)

HSP 1 Score: 96.7 bits (239), Expect = 2.650e-21
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 MNSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEGLMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKI 84
            M+ +  HY+   L Q+YKIV SFD LG+PV ++S LGTGVKDFFYEPA+GL++SP AFG+GVAKG+ SLV ++  G+    +KI
Sbjct:  270 MDRISQHYIQQGLTQVYKIVFSFDVLGNPVSLVSNLGTGVKDFFYEPAQGLVQSPMAFGRGVAKGSTSLVKHSVYGLSSTVSKI 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119887.1537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Y9_ECTSI1.290e-4497.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKT6_9PHAE1.250e-3991.67VPS13_C domain-containing protein n=1 Tax=Ectocarp... [more]
L1IXT3_GUITC1.480e-2553.68VPS13_C domain-containing protein n=1 Tax=Guillard... [more]
A0A7S4JFQ1_GUITH6.330e-2553.68Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S0HSC2_9CRYP8.550e-2553.68Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S0QEK5_9CRYP1.740e-2455.42Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0XUQ8_HEMAN4.870e-2456.47Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
W7TRD9_9STRA1.280e-2262.20Vacuolar protein sorting-associated protein 13 fam... [more]
UPI001D05367F2.440e-2149.41uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A7S4L3E8_9EUKA2.650e-2157.14Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 1..88
e-value: 6.9E-32
score: 110.6
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 2..95
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119887contigH-elongata_contig119887:437..1362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119887.1537.1mRNA_H-elongata_contig119887.1537.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119887 431..1362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119887.1537.1 ID=prot_H-elongata_contig119887.1537.1|Name=mRNA_H-elongata_contig119887.1537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
MNSLQSHYVGALLRQLYKIVGSFDFLGDPVGVLSQLGTGVKDFFYEPAEG
LMKSPTAFGKGVAKGTMSLVGNTTSGVLGFTTKITCVLPDAMLVLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR026847VPS13