prot_H-elongata_contig119849.1531.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119849.1531.1
Unique Nameprot_H-elongata_contig119849.1531.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.470e-31
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 LAREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQ 70
            L REK ARE R  D+LRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFF+K+TLCEKV+
Sbjct:  462 LEREKAAREARNADSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVE 531          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A0J1B300_9TREE (Eukaryotic translation initiation factor 5B n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J1B300_9TREE)

HSP 1 Score: 105 bits (262), Expect = 9.990e-25
Identity = 52/73 (71.23%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    2 AREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQCCRR 74
            AR K A+  + +  LRSPI CI+GHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFF K+ L EK Q   +
Sbjct:  602 ARRKAAQAQQSKTDLRSPICCILGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFPKEALVEKTQAVNK 674          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A7S3ZUV1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUV1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.850e-24
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    1 LAREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQ 70
            LAREK   +DR    LRSPI CIMGHVDTGKTKLLDKIRQT+VQ+GEAGGITQQIGATFF   TL EK++
Sbjct:  337 LAREKRRDDDRSESRLRSPICCIMGHVDTGKTKLLDKIRQTNVQDGEAGGITQQIGATFFDDATLKEKIR 406          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A7S3JXB3_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXB3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.460e-24
Identity = 53/73 (72.60%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 LAREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQCCR 73
            L REK   E R  D LR+PI CIMGHVDTGKTKLLDKIRQT+VQ+GEAGGITQQIGAT+F K TL EK++  R
Sbjct:  359 LEREKKNEEARSLDRLRAPICCIMGHVDTGKTKLLDKIRQTNVQDGEAGGITQQIGATYFDKATLVEKIKPVR 431          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A0L0T397_ALLM3 (Eukaryotic translation initiation factor 5B n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T397_ALLM3)

HSP 1 Score: 103 bits (258), Expect = 3.460e-24
Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    2 AREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQCCRRVQ 76
            AR+K A   R +D LRSPI CI+GHVDTGKTKLLDKIRQT+VQEGEAGGITQQIGAT+F  D + +KV   + V+
Sbjct:  545 ARQKAAMAARSKDNLRSPICCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVDAIEKKVSVMKNVE 619          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: K1VJM2_TRIAC (Eukaryotic translation initiation factor 5B n=1 Tax=Trichosporon asahii var. asahii (strain CBS 8904) TaxID=1220162 RepID=K1VJM2_TRIAC)

HSP 1 Score: 103 bits (258), Expect = 3.470e-24
Identity = 52/69 (75.36%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    2 AREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQ 70
            AR K A   + +  LRSPI CI+GHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFF K+ L EK Q
Sbjct:  602 ARRKAAEAAQDKTDLRSPICCILGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFPKEALVEKTQ 670          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: J6ETL0_TRIAS (Eukaryotic translation initiation factor 5B n=1 Tax=Trichosporon asahii var. asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC 7840 / NBRC 103889/ NCYC 2677 / UAMH 7654) TaxID=1186058 RepID=J6ETL0_TRIAS)

HSP 1 Score: 103 bits (258), Expect = 3.490e-24
Identity = 52/69 (75.36%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    2 AREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQ 70
            AR K A   + +  LRSPI CI+GHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFF K+ L EK Q
Sbjct:  611 ARRKAAEAAQDKTDLRSPICCILGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFPKEALVEKTQ 679          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.720e-24
Identity = 50/55 (90.91%), Postives = 54/55 (98.18%), Query Frame = 0
Query:   15 TLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKV 69
            +LRSPIVCIMGHVDTGKTKLLDKIRQT+VQEGEAGGITQQIGATFFAK+TL +KV
Sbjct:  423 SLRSPIVCIMGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATFFAKETLKDKV 477          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: A0A427XWH0_9TREE (Eukaryotic translation initiation factor 5B n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XWH0_9TREE)

HSP 1 Score: 103 bits (257), Expect = 4.740e-24
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    3 REKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQCCRR 74
            R K A  ++ +  LRSPI CI+GHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFF ++ L EK Q   R
Sbjct:  599 RRKAAEANQDKTDLRSPICCILGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFPREALVEKTQVVNR 670          
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Match: U6LJX5_9EIME (Translation initiation factor IF-2, putative n=1 Tax=Eimeria brunetti TaxID=51314 RepID=U6LJX5_9EIME)

HSP 1 Score: 103 bits (256), Expect = 6.360e-24
Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 LAREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFAKDTLCEKVQCCRRV 75
            +A+ K   + +Q+ +LRSPI CIMGHVDTGKTKLLDK+R+T+VQ GEAGGITQQIGATFF K+ L E  QCC+RV
Sbjct:  622 VAKLKTLNKSKQQPSLRSPICCIMGHVDTGKTKLLDKLRRTNVQLGEAGGITQQIGATFFPKEALLE--QCCKRV 694          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119849.1531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N8_9PHAE4.470e-3187.14Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A0J1B300_9TREE9.990e-2571.23Eukaryotic translation initiation factor 5B n=1 Ta... [more]
A0A7S3ZUV1_9STRA1.850e-2475.71Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3JXB3_9STRA3.460e-2472.60Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A0L0T397_ALLM33.460e-2468.00Eukaryotic translation initiation factor 5B n=1 Ta... [more]
K1VJM2_TRIAC3.470e-2475.36Eukaryotic translation initiation factor 5B n=1 Ta... [more]
J6ETL0_TRIAS3.490e-2475.36Eukaryotic translation initiation factor 5B n=1 Ta... [more]
A0A836CHS5_9STRA4.720e-2490.91Tr-type G domain-containing protein n=1 Tax=Tribon... [more]
A0A427XWH0_9TREE4.740e-2470.83Eukaryotic translation initiation factor 5B n=1 Ta... [more]
U6LJX5_9EIME6.360e-2468.00Translation initiation factor IF-2, putative n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 14..71
e-value: 2.3E-18
score: 68.1
IPR015760Translation initiation factor IF- 2PANTHERPTHR43381FAMILY NOT NAMEDcoord: 9..63
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119849contigH-elongata_contig119849:662..1721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119849.1531.1mRNA_H-elongata_contig119849.1531.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119849 662..1721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119849.1531.1 ID=prot_H-elongata_contig119849.1531.1|Name=mRNA_H-elongata_contig119849.1531.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
LAREKIAREDRQRDTLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGG
ITQQIGATFFAKDTLCEKVQCCRRVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015760TIF_IF2
IPR027417P-loop_NTPase