prot_H-elongata_contig119824.1528.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119824.1528.1
Unique Nameprot_H-elongata_contig119824.1528.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.120e-28
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 DGFDIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALYAGHLAAAAMDKEGRLGKLI 68
            DGFD+AGSFLLRSLAKPSLNVDL+LR+PS+C+V RDSLNHRYLDKRALYAGH+A  AMD  G LGKL+
Sbjct:  179 DGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHVAKTAMDAAGSLGKLV 246          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.090e-28
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 DGFDIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALYAGHLAAAAMDKEGRLGKLI 68
            +GFD+AGSFLLRSLAKPSLNVDL+LR+PS+C+V RDSLNHRYLDKRALYAGHLA  AMD  G LGKL+
Sbjct:  184 NGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAGALGKLV 251          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: L1JNQ1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNQ1_GUITC)

HSP 1 Score: 60.1 bits (144), Expect = 6.500e-9
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    4 DIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALYAGHLAAA 56
            ++ GSFLLR+L KP LNVD+++ +P+ CL  +D LN R++ KR +Y  H+A A
Sbjct:  170 ELVGSFLLRTLVKPDLNVDMAVEMPADCLHAKDFLNGRFMYKRNMYLSHIAKA 222          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: UPI001455CC0A (nucleolar protein 6-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455CC0A)

HSP 1 Score: 60.1 bits (144), Expect = 6.500e-9
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    5 IAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALYAGHLA 54
            + GSFLL +L +P LN+DL+L +P  C  P+D LN RY  KRALY  +LA
Sbjct:  128 VVGSFLLDTLTRPDLNIDLALEMPQSCRQPKDYLNFRYHHKRALYCAYLA 177          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: A0A803Q1Y2_CANSA (Uncharacterized protein n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q1Y2_CANSA)

HSP 1 Score: 58.5 bits (140), Expect = 2.270e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    3 FDIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALY 49
            F+I GS+ ++ +AKP +NVDL LR+P +C   +D LNHRY  KR LY
Sbjct:   71 FEIGGSYSIKCIAKPDINVDLFLRLPKECFHEKDYLNHRYHGKRCLY 117          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: S8E1Q7_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E1Q7_9LAMI)

HSP 1 Score: 57.8 bits (138), Expect = 4.230e-8
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    4 DIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALY 49
            +I GS+ +RS+AKP +N+DL LR+P +C   +D LNHRY  KR LY
Sbjct:   70 EIGGSYSIRSVAKPDVNIDLFLRLPKECFYEKDYLNHRYHAKRFLY 115          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: B9ST37_RICCO (Nucleolar RNA-associated protein, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9ST37_RICCO)

HSP 1 Score: 56.6 bits (135), Expect = 1.080e-7
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    3 FDIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALY 49
            F+I GS+ ++ +AKPS+NVDL L +P +C   +D LNHRY  KR LY
Sbjct:   77 FEIRGSYSIKCIAKPSINVDLFLHLPKECFHEKDYLNHRYHAKRFLY 123          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: A0A7I8JX86_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JX86_SPIIN)

HSP 1 Score: 56.6 bits (135), Expect = 1.080e-7
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    5 IAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALY 49
            +AGS  +RS+AKP +NVDL +R+P KC + +D +NHRY  +R LY
Sbjct:   79 VAGSHSIRSIAKPDVNVDLLVRMPRKCFLEKDYMNHRYHARRCLY 123          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: A0A444CCS9_ENSVE (Nrap domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444CCS9_ENSVE)

HSP 1 Score: 56.2 bits (134), Expect = 1.180e-7
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    1 DGFDIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALY 49
            +   + GS+ +RS+AKP +NVDL +R+P +C   +D LNHRY  KR LY
Sbjct:   72 ESIQVGGSYSIRSVAKPDINVDLLVRMPKECFHEKDYLNHRYHAKRLLY 120          
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Match: A0A0M0JU12_9EUKA (Nucleolar protein 6 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU12_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 1.290e-7
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    4 DIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALYAGHLA 54
            D+ GS+LLR++  P LNVD+++ +P+   + +D L+ RY DKR LY  HLA
Sbjct:  112 DLVGSYLLRTVTAPELNVDVAVELPASMFLEKDYLDQRYADKRLLYLTHLA 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119824.1528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGX0_ECTSI1.120e-2880.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEV9_9PHAE2.090e-2880.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1JNQ1_GUITC6.500e-949.06Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
UPI001455CC0A6.500e-954.00nucleolar protein 6-like n=1 Tax=Asterias rubens T... [more]
A0A803Q1Y2_CANSA2.270e-853.19Uncharacterized protein n=4 Tax=Cannabis sativa Ta... [more]
S8E1Q7_9LAMI4.230e-854.35Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
B9ST37_RICCO1.080e-753.19Nucleolar RNA-associated protein, putative n=2 Tax... [more]
A0A7I8JX86_SPIIN1.080e-753.33Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A444CCS9_ENSVE1.180e-748.98Nrap domain-containing protein n=1 Tax=Ensete vent... [more]
A0A0M0JU12_9EUKA1.290e-747.06Nucleolar protein 6 n=1 Tax=Chrysochromulina tobin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035082Nrap protein domain 1PFAMPF03813Nrapcoord: 21..60
e-value: 7.9E-10
score: 39.0
NoneNo IPR availableGENE3D3.30.460.10coord: 1..66
e-value: 3.3E-13
score: 51.6
IPR005554NOL6/Upt22PANTHERPTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINcoord: 3..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119824contigH-elongata_contig119824:270..473 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119824.1528.1mRNA_H-elongata_contig119824.1528.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119824 270..473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119824.1528.1 ID=prot_H-elongata_contig119824.1528.1|Name=mRNA_H-elongata_contig119824.1528.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
DGFDIAGSFLLRSLAKPSLNVDLSLRIPSKCLVPRDSLNHRYLDKRALYA
GHLAAAAMDKEGRLGKLI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035082Nrap_D1
IPR005554NOL6/Upt22