prot_H-elongata_contig119664.1515.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119664.1515.1
Unique Nameprot_H-elongata_contig119664.1515.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
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BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 4.770e-52
Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGANDFHSM 94
            GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEV A +  S+
Sbjct:    2 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESI 95
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.390e-51
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGA 88
            GVRTKTVKKSAR IIEKYYSRLT+DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEV A
Sbjct:    2 GVRTKTVKKSARVIIEKYYSRLTLDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSA 89
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 165 bits (417), Expect = 9.260e-51
Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGAND 90
            GVRTKTVKKSAR IIEKYYSRLT+DFHTNKRVCDEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERR+DFVPEV A D
Sbjct:   12 GVRTKTVKKSARTIIEKYYSRLTLDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALD 101
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 159 bits (403), Expect = 9.780e-49
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGAND 90
            GVRTKTVK+SAR I+EKYYSRL +DFHTNKRVCDEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEV A D
Sbjct:    2 GVRTKTVKRSARLIVEKYYSRLGVDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAID 91
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A4D9CUE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUE3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 9.460e-48
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVG 87
            GVRTKTVKKSAR IIEKYYSRLTMDFHTNKRV DEVA +PSKRMRNKIAGFVTHLMKRIQ+GPVRGISLKLQEEERERRLDFVPEV 
Sbjct:    2 GVRTKTVKKSARVIIEKYYSRLTMDFHTNKRVVDEVAEVPSKRMRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRLDFVPEVS 88
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A7S2SHA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHA1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.020e-47
Identity = 81/98 (82.65%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGANDFHSMLKRD 98
            GVRTKTVK+ +R I+EKYY RLT+DFHTNKRV DEVAIIPSKRMRNKIAGF THLMKRIQRGPVRGISLKLQEEERERRLDFVPEV A D    L  D
Sbjct:   10 GVRTKTVKRHSRMIVEKYYGRLTLDFHTNKRVVDEVAIIPSKRMRNKIAGFTTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSALDVEETLTVD 107
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A485KLT1_9STRA (Aste57867_8897 protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A485KLT1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.590e-47
Identity = 82/101 (81.19%), Postives = 92/101 (91.09%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGANDFHSM-LKRDTR 100
            GVRTKTVK+SA  IIEKYY+RLT+DF +NKRVCDEVAIIPSKRMRNKIAG++THLMKRIQRGPVRGISLKLQEEERERRLDFVPEV A +  ++ L +DTR
Sbjct:    2 GVRTKTVKRSAIQIIEKYYARLTLDFDSNKRVCDEVAIIPSKRMRNKIAGYITHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAINTETIDLDQDTR 102
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: W7TDH0_9STRA (40s ribosomal protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDH0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.620e-47
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVG 87
            GVRTKTVKKSAR IIEKYYSRLTMDFHTNKRV DEVA +PSKRMRNKIAGFVTHLMKRIQ+GPVRGISLKLQEEERERRLDFVPEV 
Sbjct:    2 GVRTKTVKKSARVIIEKYYSRLTMDFHTNKRVVDEVAEVPSKRMRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRLDFVPEVS 88
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A067CK86_SAPPC (40S ribosomal protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CK86_SAPPC)

HSP 1 Score: 155 bits (392), Expect = 4.790e-47
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 0 
Query:    1 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGANDFHSM-LKRDTR 100
            GVRTKTVK+SA  IIEKYYSRLT+DF +NKRVCDEVAIIPSKRMRNKIAG++THLMKRIQRGPVRGISLKLQEEERERRLDFVPEV A +  ++ +  DTR
Sbjct:    2 GVRTKTVKRSAVQIIEKYYSRLTLDFDSNKRVCDEVAIIPSKRMRNKIAGYITHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAINTDAIEIDNDTR 102
[Close]
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Match: A0A2V3J2T3_9FLOR (40S ribosomal protein S17 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2T3_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 5.210e-47
Identity = 80/100 (80.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:    2 VRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGANDFHSM-LKRDTR 100
            VRTKTVKKSAR +IEKYYSRLT+DF TNKR+CDEVAIIPSKR+RNK+AGFVTHLM RIQ+GPVRGISLKLQEEERERR+DFVPEV A D   + +  DTR
Sbjct:    4 VRTKTVKKSARQVIEKYYSRLTLDFQTNKRICDEVAIIPSKRLRNKVAGFVTHLMTRIQKGPVRGISLKLQEEERERRMDFVPEVSAIDLEVIEVDNDTR 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119664.1515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT5_ECTSI4.770e-5292.5540S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CIS9_9STRA5.390e-5196.5940S ribosomal protein S17 n=2 Tax=Tribonema minus ... [more]
A0A7S4SMK2_9DINO9.260e-5193.33Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
F0Y4Q4_AURAN9.780e-4988.89Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A4D9CUE3_9STRA9.460e-4893.10Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SHA1_9STRA2.020e-4782.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A485KLT1_9STRA3.590e-4781.19Aste57867_8897 protein n=8 Tax=Aphanomyces TaxID=1... [more]
W7TDH0_9STRA4.620e-4793.1040s ribosomal protein n=1 Tax=Nannochloropsis gadi... [more]
A0A067CK86_SAPPC4.790e-4781.1940S ribosomal protein n=4 Tax=Saprolegniaceae TaxI... [more]
A0A2V3J2T3_9FLOR5.210e-4780.0040S ribosomal protein S17 n=1 Tax=Gracilariopsis c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001210Ribosomal protein S17ePFAMPF00833Ribosomal_S17ecoord: 2..90
e-value: 5.1E-51
score: 171.7
IPR001210Ribosomal protein S17ePANTHERPTHR1073240S RIBOSOMAL PROTEIN S17coord: 2..90
IPR001210Ribosomal protein S17eHAMAPMF_00511Ribosomal_S17ecoord: 1..61
score: 16.312
IPR036401Ribosomal protein S17e-like superfamilyGENE3D1.10.60.20coord: 1..60
e-value: 7.5E-34
score: 117.2
IPR036401Ribosomal protein S17e-like superfamilySUPERFAMILY116820Rps17e-likecoord: 2..60
IPR018273Ribosomal protein S17e, conserved sitePROSITEPS00712RIBOSOMAL_S17Ecoord: 39..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119664contigH-elongata_contig119664:1521..1820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119664.1515.1mRNA_H-elongata_contig119664.1515.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119664 1521..1820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119664.1515.1 ID=prot_H-elongata_contig119664.1515.1|Name=mRNA_H-elongata_contig119664.1515.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAG
FVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVGANDFHSMLKRDTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001210Ribosomal_S17e
IPR036401RPS17e-like_sf
IPR018273Ribosomal_S17e_CS