prot_H-elongata_contig119623.1514.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119623.1514.1
Unique Nameprot_H-elongata_contig119623.1514.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 2.540e-77
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRD TAG+QGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKY+LKLDNPKGFYHELHRPSHFLNFTS
Sbjct: 2312 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDATAGAQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYALKLDNPKGFYHELHRPSHFLNFTS 2431          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A7S3Y066_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y066_HETAK)

HSP 1 Score: 219 bits (559), Expect = 5.410e-64
Identity = 100/120 (83.33%), Postives = 107/120 (89.17%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            MADNK+WDGEKTIV+TCSFTPGSCSLTAYKLTPQGFEWGKA+R   A  QGYAPTHYEKVQMLLSDRFLGFFMVPEDD WNYNF GV+HS  MKYSLKL NPK +YHE HRP+HFLNF +
Sbjct: 1795 MADNKSWDGEKTIVVTCSFTPGSCSLTAYKLTPQGFEWGKANRGQGANPQGYAPTHYEKVQMLLSDRFLGFFMVPEDDVWNYNFNGVNHSQTMKYSLKLANPKEYYHEKHRPAHFLNFAA 1914          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A7J7JH58_BUGNE (PRPF8 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JH58_BUGNE)

HSP 1 Score: 199 bits (506), Expect = 3.870e-63
Identity = 87/120 (72.50%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            M+DN +WDGEKT+VITCSFTPGSCSLTAYKLTP GFEWG+ + D     +GY P+HYE+VQMLLSDRFLG+FMVP    WNYNFMGV H   MKY L L NPK FYHE+HRPSHF+NFTS
Sbjct:   54 MSDNPSWDGEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPIQGSWNYNFMGVRHEANMKYELMLSNPKDFYHEVHRPSHFMNFTS 173          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A836C932_9STRA (NUC071 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C932_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.650e-62
Identity = 96/119 (80.67%), Postives = 106/119 (89.08%), Query Frame = 0
Query:    2 ADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            ADNK+WD EKT+VITCSFTPGSCSLTAYKLT QG EWGKA+RD    +QGY+P HYEKVQMLLSDRF+GFFMVP+D+RWNYNFMGVSHS GMKY LKL NPK FY E+HRPSHFLNFT+
Sbjct: 2247 ADNKSWDPEKTVVITCSFTPGSCSLTAYKLTQQGLEWGKANRDGAGAAQGYSPVHYEKVQMLLSDRFMGFFMVPDDERWNYNFMGVSHSAGMKYRLKLANPKEFYAEVHRPSHFLNFTA 2365          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: UPI00092EC984 (pre-mRNA-processing-splicing factor 8-like n=1 Tax=Gavialis gangeticus TaxID=94835 RepID=UPI00092EC984)

HSP 1 Score: 196 bits (499), Expect = 3.960e-62
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFT 119
            MADN +WDGEKTI+ITCSFTPGSC+LTAYKLTP G+EWG+ + D     +GY P+HYE+VQMLLSDRFLGFFMVP    WNYNFMGV H   MKY L+L NPK FYHE+HRPSHFLNF 
Sbjct:   50 MADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFA 168          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A7S2SUH9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUH9_9STRA)

HSP 1 Score: 195 bits (496), Expect = 6.340e-62
Identity = 88/121 (72.73%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGS-QGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            ++DNK+WDGEK I+ITCSFTPGSCSLTAYKLTP GFEWG+ +R+    + QGY    YEKVQMLLSDRFLGFFMVP D  WNYNFMGV H+VGMKY LKL+NP+ FYHE HRPSHF+NF +
Sbjct:   30 LSDNKSWDGEKCIMITCSFTPGSCSLTAYKLTPSGFEWGQKNRESLGQNPQGYGSGMYEKVQMLLSDRFLGFFMVPGDGIWNYNFMGVKHAVGMKYDLKLENPREFYHEFHRPSHFMNFAT 150          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A1B6G3I4_9HEMI (MPN domain-containing protein (Fragment) n=2 Tax=Neoptera TaxID=33340 RepID=A0A1B6G3I4_9HEMI)

HSP 1 Score: 200 bits (509), Expect = 6.470e-62
Identity = 88/120 (73.33%), Postives = 99/120 (82.50%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            MA+N +WDGEKT+VITCSFTPGSCSLTAYKLTP GFEWG+ + D     +GY P+HYEKVQMLLSDRFLGFFMVP    WNYNFMGV H   MKY L+L NPK FYHE+HRP+HFLNF+S
Sbjct:  181 MAENPSWDGEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLSNPKEFYHEVHRPAHFLNFSS 300          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A2D4IAF6_MICLE (MPN domain-containing protein (Fragment) n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A2D4IAF6_MICLE)

HSP 1 Score: 197 bits (500), Expect = 9.290e-62
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFT 119
            MADN +WDGEKTI+ITCSFTPGSC+LTAYKLTP G+EWG+ + D     +GY P+HYE+VQMLLSDRFLGFFMVP    WNYNFMGV H   MKY L+L NPK FYHE+HRPSHFLNF 
Sbjct:   89 MADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFA 207          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: E4Z4Z2_OIKDI (MPN domain-containing protein (Fragment) n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4Z4Z2_OIKDI)

HSP 1 Score: 199 bits (506), Expect = 1.940e-61
Identity = 88/120 (73.33%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            MADN  WDGEKTIVITCSFTPGSCSLTAYKLTP G+EWG+ + D  +  +GY P+HYEKVQMLLSD+FLGFFMVP    WNYNF+G  H V MKY L+L NPK FYHE+HRP HFLNFTS
Sbjct:  181 MADNPEWDGEKTIVITCSFTPGSCSLTAYKLTPGGYEWGRQNNDKGSNPKGYLPSHYEKVQMLLSDKFLGFFMVPSAGSWNYNFIGARHDVNMKYELQLANPKEFYHEIHRPQHFLNFTS 300          
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Match: A0A2R2MIB7_LINUN (pre-mRNA-processing-splicing factor 8-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MIB7_LINUN)

HSP 1 Score: 196 bits (497), Expect = 2.000e-61
Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 0
Query:    1 MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQGYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLDNPKGFYHELHRPSHFLNFTS 120
            M+DN  WDGEKT++ITCSFTPGSCSLTAYKLTP G+EWG+ + D     +GY P+HYEKVQMLLSDRFLGFFMVP    WNYNFMGV H    KY L+L NPK FYHE+HRPSHFLNF+S
Sbjct:   79 MSDNPAWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSVGSWNYNFMGVRHDPNKKYELQLANPKEFYHEVHRPSHFLNFSS 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119623.1514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K085_9PHAE2.540e-7797.50MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3Y066_HETAK5.410e-6483.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7J7JH58_BUGNE3.870e-6372.50PRPF8 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0... [more]
A0A836C932_9STRA1.650e-6280.67NUC071 domain-containing protein n=1 Tax=Tribonema... [more]
UPI00092EC9843.960e-6272.27pre-mRNA-processing-splicing factor 8-like n=1 Tax... [more]
A0A7S2SUH9_9STRA6.340e-6272.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1B6G3I4_9HEMI6.470e-6273.33MPN domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A2D4IAF6_MICLE9.290e-6272.27MPN domain-containing protein (Fragment) n=2 Tax=E... [more]
E4Z4Z2_OIKDI1.940e-6173.33MPN domain-containing protein (Fragment) n=1 Tax=O... [more]
A0A2R2MIB7_LINUN2.000e-6171.67pre-mRNA-processing-splicing factor 8-like n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 1..120
e-value: 5.6E-56
score: 191.8
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 3..119
IPR012984PROCT domainPFAMPF08084PROCTcoord: 13..119
e-value: 7.9E-52
score: 174.4
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 3..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119623contigH-elongata_contig119623:458..1593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119623.1514.1mRNA_H-elongata_contig119623.1514.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119623 449..1593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119623.1514.1 ID=prot_H-elongata_contig119623.1514.1|Name=mRNA_H-elongata_contig119623.1514.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MADNKTWDGEKTIVITCSFTPGSCSLTAYKLTPQGFEWGKAHRDPTAGSQ
GYAPTHYEKVQMLLSDRFLGFFMVPEDDRWNYNFMGVSHSVGMKYSLKLD
NPKGFYHELHRPSHFLNFTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012984PROCT
IPR027652PRP8