prot_H-elongata_contig119612.1513.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119612.1513.1
Unique Nameprot_H-elongata_contig119612.1513.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: D8LTM6_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM6_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.550e-30
Identity = 49/59 (83.05%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MKPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRPCA 59
            MKPW+LH+RWT+LIT+EFHRQGD E E G+P+SPLCSREGHNQAKSQCDF+NFVVRPCA
Sbjct:  537 MKPWDLHERWTRLITEEFHRQGDLEAEKGVPVSPLCSREGHNQAKSQCDFVNFVVRPCA 595          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A7S3XSI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSI7_HETAK)

HSP 1 Score: 91.3 bits (225), Expect = 1.920e-20
Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSRE-GHNQAKSQCDFINFVVRPC 58
            KPW LH RW++LI +EF RQGD E+  G+PISPLC R  G N AKSQCDF++FVVRPC
Sbjct:  261 KPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPC 318          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.220e-19
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRPC 58
            KPW++H+RW+ +IT+EF +QGD E+  G+ ISPLC R   N AKSQCDFI+F+VRPC
Sbjct: 1740 KPWDIHRRWSDMITEEFFKQGDLERGQGLQISPLCDRAQGNLAKSQCDFIDFIVRPC 1796          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: D7G4U4_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U4_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 4.120e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRPC 58
            KPWE+H +W++L+T+EF +QGD+E   G+ +SPLC R   N  KSQCDFI+F+VRPC
Sbjct:  662 KPWEVHHKWSELVTEEFFKQGDKEAARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPC 718          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A813G947_POLGL (Phosphodiesterase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G947_POLGL)

HSP 1 Score: 83.6 bits (205), Expect = 2.370e-17
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRP 57
            KPWELHK W+  + DEFH QGD+EK +G+PISPLC REG +  KSQ  F+ F+  P
Sbjct:  770 KPWELHKAWSLSVVDEFHAQGDKEKRLGLPISPLCDREGFDLPKSQAGFLQFICLP 825          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A7S3XXI8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXI8_HETAK)

HSP 1 Score: 80.1 bits (196), Expect = 1.920e-16
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRPC 58
            +PW++H +WT LI++EF  QG REKE G+PIS LC R      KSQCDFINF+V+PC
Sbjct:  132 RPWDIHCQWTHLISEEFFAQGAREKEEGLPISFLCDRATVVLPKSQCDFINFLVKPC 188          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A8C9W8X0_SCLFO (Phosphodiesterase n=15 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9W8X0_SCLFO)

HSP 1 Score: 80.5 bits (197), Expect = 2.850e-16
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 MKPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRP 57
            +KPW LH RWTK + +EF RQGDREK +G+P+SPLC R+    A+SQ  FI+F+V P
Sbjct:  403 IKPWRLHSRWTKALMEEFFRQGDREKVLGLPLSPLCDRKNTLVAQSQIGFISFIVDP 459          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A7S1C4N6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4N6_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.920e-16
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRPC 58
            +P  LH++W+ LI+ EFH QGD+E+ +G+PISPLC R+  + AKSQ  FI FVVRPC
Sbjct:  817 RPLPLHEKWSNLISREFHMQGDKERVLGLPISPLCDRDNFDLAKSQQGFIEFVVRPC 873          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: A0A3B3R7W7_9TELE (Phosphodiesterase n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R7W7_9TELE)

HSP 1 Score: 79.7 bits (195), Expect = 5.250e-16
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRP 57
            KPW LH RWTK + +EF RQGD+E+E+G+P+SPLC R+    A+SQ  FI+F+V P
Sbjct:  356 KPWALHSRWTKALMEEFFRQGDKEEELGLPLSPLCDRKNTLVAQSQIGFIDFIVDP 411          
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Match: UPI001E1DEF74 (calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A-like isoform X1 n=14 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEF74)

HSP 1 Score: 79.7 bits (195), Expect = 5.350e-16
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 KPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDFINFVVRP 57
            K W++HKRWT L+ +EF RQGDRE+E+G+P SPLC R+    A+SQ  FI+F+V P
Sbjct:  567 KDWDIHKRWTDLLLEEFFRQGDREQELGLPFSPLCDRKNTLVAESQIGFIDFIVEP 622          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119612.1513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTM6_ECTSI1.550e-3083.05Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S3XSI7_HETAK1.920e-2067.24Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z5P1_9STRA2.220e-1961.40Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
D7G4U4_ECTSI4.120e-1957.89Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A813G947_POLGL2.370e-1758.93Phosphodiesterase n=1 Tax=Polarella glacialis TaxI... [more]
A0A7S3XXI8_HETAK1.920e-1659.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8C9W8X0_SCLFO2.850e-1657.89Phosphodiesterase n=15 Tax=Scleropages formosus Ta... [more]
A0A7S1C4N6_9STRA3.920e-1657.89Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3B3R7W7_9TELE5.250e-1657.14Phosphodiesterase n=3 Tax=Paramormyrops kingsleyae... [more]
UPI001E1DEF745.350e-1657.14calcium/calmodulin-dependent 3',5'-cyclic nucleoti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0369713'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyGENE3D1.10.1300.10coord: 1..59
e-value: 1.5E-24
score: 88.7
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPFAMPF00233PDEase_Icoord: 1..58
e-value: 6.4E-19
score: 68.6
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPROSITEPS51845PDEASE_I_2coord: 1..59
score: 26.0
NoneNo IPR availablePANTHERPTHR11347:SF203coord: 3..57
NoneNo IPR availablePANTHERPTHR11347CYCLIC NUCLEOTIDE PHOSPHODIESTERASEcoord: 3..57
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119612contigH-elongata_contig119612:144..938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119612.1513.1mRNA_H-elongata_contig119612.1513.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119612 144..962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119612.1513.1 ID=prot_H-elongata_contig119612.1513.1|Name=mRNA_H-elongata_contig119612.1513.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MKPWELHKRWTKLITDEFHRQGDREKEMGIPISPLCSREGHNQAKSQCDF
INFVVRPCA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036971PDEase_catalytic_dom_sf
IPR002073PDEase_catalytic_dom