prot_H-elongata_contig119338.1488.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119338.1488.1
Unique Nameprot_H-elongata_contig119338.1488.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: D8LE09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE09_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 5.340e-21
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEENR 59
            + RCADCG PCADWASV+HG+FVCL CAG  R+LG+HV FTRSL MD+WT E  R
Sbjct:  362 NSRCADCGAPCADWASVAHGSFVCLKCAGQQRSLGMHVIFTRSLVMDKWTDESLR 416          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: A0A6H5K7B0_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B0_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 6.770e-21
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    7 RCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTG 55
            RCADCG PCADWASV+HG+FVCL CAG HR+LG+ V FTRSL MD+WTG
Sbjct:  482 RCADCGAPCADWASVAHGSFVCLKCAGQHRSLGMQVIFTRSLVMDKWTG 530          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: Q01CE5_OSTTA (Arf GTPase activating protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01CE5_OSTTA)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-16
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEE 57
            +R CADCGG   DWASV+HGAF+CL+C+G HR+LG+HV+F RS TMD W+ ++
Sbjct:   12 NRSCADCGGANPDWASVNHGAFLCLSCSGIHRSLGVHVSFVRSATMDSWSVDQ 64          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: C1E391_MICCC (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E391_MICCC)

HSP 1 Score: 76.6 bits (187), Expect = 1.800e-16
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEENR 59
            ++ CADC     DWASV HG F+CLNC+G HR+LG+HV+F RS TMD WT  E R
Sbjct:   23 NQVCADCPTRNPDWASVKHGIFICLNCSGIHRSLGVHVSFVRSATMDTWTQAEAR 77          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: A0A7S0IGQ4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGQ4_MICPS)

HSP 1 Score: 77.4 bits (189), Expect = 2.090e-16
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEENR 59
            ++ CADC     DWASV HG F+CLNC+G HR+LG+HV+F RS TMD WT  E R
Sbjct:   37 NQVCADCPARNPDWASVKHGIFICLNCSGIHRSLGVHVSFVRSATMDTWTKAEAR 91          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: A0A4P9Z5F0_9FUNG (Arf-GAP domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z5F0_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 2.370e-16
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEE 57
            +R C DCG P   WASV+ G F C++C+G HRALG+HV+F RS+TMD+W  ++
Sbjct:   19 NRTCIDCGAPSPQWASVTLGTFFCIDCSGQHRALGVHVSFVRSITMDKWAPDQ 71          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: A0A1E3HWG2_9TREE (ADP-ribosylation factor GTPase-activating protein 1 n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3HWG2_9TREE)

HSP 1 Score: 80.5 bits (197), Expect = 3.230e-16
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEENRG 60
            ++ C DC  PC  WASVS+G F+CL C+G HR LG+H++F RS+TMD+W+ E+  G
Sbjct:   19 NKVCVDCSAPCPQWASVSYGIFICLECSGVHRGLGVHISFVRSITMDKWSDEQLGG 74          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: A0A2G4SQF8_RHIZD (Arf GTPase activating protein n=3 Tax=Rhizopus microsporus TaxID=58291 RepID=A0A2G4SQF8_RHIZD)

HSP 1 Score: 75.1 bits (183), Expect = 6.750e-16
Identity = 28/53 (52.83%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEE 57
            +R C DC  P   WASVS+G F+CLNC+G HR+ G+H++F RS+TMD+W  ++
Sbjct:   16 NRLCFDCSAPNPQWASVSYGIFICLNCSGVHRSFGVHISFVRSITMDKWFDDQ 68          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: G7E0V5_MIXOS (Arf-GAP domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E0V5_MIXOS)

HSP 1 Score: 79.0 bits (193), Expect = 1.310e-15
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEENR 59
            ++ C DC  P   WASVSHG ++CLNC+G HR+LG+H++F RSLTMD+W+  + R
Sbjct:   19 NKLCCDCKAPMPQWASVSHGTYICLNCSGVHRSLGVHISFVRSLTMDKWSEAQVR 73          
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Match: A0A4D9D8B9_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8B9_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.380e-15
Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    5 DRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTMDRWTGEENR 59
            ++ CADC  P   WASVS+G+F+CL+C+G HRALG+H++F RS+TMD WT ++ R
Sbjct:   19 NKVCADCPAPNPQWASVSYGSFICLDCSGQHRALGVHLSFVRSITMDSWTDKQIR 73          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119338.1488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE09_ECTSI5.340e-2170.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7B0_9PHAE6.770e-2177.55Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
Q01CE5_OSTTA1.120e-1662.26Arf GTPase activating protein n=2 Tax=Ostreococcus... [more]
C1E391_MICCC1.800e-1660.00Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S0IGQ4_MICPS2.090e-1660.00Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A4P9Z5F0_9FUNG2.370e-1654.72Arf-GAP domain-containing protein n=1 Tax=Syncepha... [more]
A0A1E3HWG2_9TREE3.230e-1653.57ADP-ribosylation factor GTPase-activating protein ... [more]
A0A2G4SQF8_RHIZD6.750e-1652.83Arf GTPase activating protein n=3 Tax=Rhizopus mic... [more]
G7E0V5_MIXOS1.310e-1554.55Arf-GAP domain-containing protein n=1 Tax=Mixia os... [more]
A0A4D9D8B9_9STRA1.380e-1556.36Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 45..66
score: 24.14
coord: 5..24
score: 40.0
coord: 24..41
score: 50.57
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 6..57
e-value: 2.5E-20
score: 72.7
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..57
score: 18.285
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 3..61
e-value: 2.6E-22
score: 81.2
NoneNo IPR availablePANTHERPTHR45686:SF4ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM Hcoord: 7..57
NoneNo IPR availablePANTHERPTHR45686FAMILY NOT NAMEDcoord: 7..57
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 5..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119338contigH-elongata_contig119338:1484..1684 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119338.1488.1mRNA_H-elongata_contig119338.1488.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119338 1484..1684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119338.1488.1 ID=prot_H-elongata_contig119338.1488.1|Name=mRNA_H-elongata_contig119338.1488.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
NYIYDRRCADCGGPCADWASVSHGAFVCLNCAGHHRALGLHVAFTRSLTM
DRWTGEENRGGVSCLEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO