prot_H-elongata_contig119246.1484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119246.1484.1
Unique Nameprot_H-elongata_contig119246.1484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5JFU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU5_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 6.000e-16
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 MMYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGS 67
            MM  V+GIILA+GLV+LP + DHW    FH++KLVR  + RDM LLIY RFFHMAS+ +  R +DG+
Sbjct:  760 MMQGVIGIILAIGLVQLPAVHDHWSCHSFHDYKLVRACLPRDMSLLIYGRFFHMASSGAPKRLQDGT 826          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5L3T1_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T1_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.830e-15
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 MMYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGS 67
            MM  V+ IIL +GLV+LP M DHW    FH++KLVR  + RDMFLLIY RFFHMAS+ +  R + G+
Sbjct:  554 MMQGVISIILTIGLVQLPAMHDHWSCHSFHDYKLVRACLPRDMFLLIYGRFFHMASSGAPERLQGGT 620          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5JWP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP6_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.820e-11
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0
Query:    2 MYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGSYD 69
            +Y V+GI++  GL R P + DHW +    N+ L R  M RD+F++ Y RFFH+A      ++ D  YD
Sbjct:   15 LYGVMGILITAGLTRKPRIIDHWGVGAHDNYPLARACMPRDLFIMFYDRFFHLAPPTGKLKKDDPQYD 82          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5KN93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN93_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.140e-10
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    2 MYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGSYD 69
            +Y V+GI++  GL + P + DHW +   +N  LVR  M RD+F+L Y RFFH+A      ++ D  YD
Sbjct:   82 LYGVMGILITTGLTKKPRIIDHWGVEAHNNNPLVRACMPRDLFILFYGRFFHLAPPTGKLKKHDPQYD 149          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5JT54_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT54_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 3.500e-10
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    2 MYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGSYD 69
            +Y V+GI++  GL + P + DHW +    N+ LVR  M RD+F+L Y RFFH+A      ++ D  YD
Sbjct:   15 LYGVMGILITTGLTKKPRIIDHWGVEAHDNYPLVRACMPRDLFILFYGRFFHLAPPNGKLKKDDPQYD 82          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5KVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH8_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 4.940e-9
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   15 VRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGS 67
            V+L  + DHW    FH+ KLVR  + RDMFLL Y RFFHMAS+ +  R +DG+
Sbjct:  859 VQLAELQDHWSYHSFHDCKLVRACLPRDMFLLTYGRFFHMASSAAPKRLQDGT 911          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5KHW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.130e-8
Identity = 26/68 (38.24%), Postives = 39/68 (57.35%), Query Frame = 0
Query:    2 MYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGSYD 69
            +Y V+GI++   L + P + D+W +    N+ LVR  M RD+F+L Y RFFH+A       + D  YD
Sbjct:  339 LYGVMGILITTRLTKKPRIIDYWGVEAHDNYPLVRACMPRDLFILFYGRFFHLAPPTGKLNKDDPQYD 406          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5LD42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD42_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.280e-8
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    2 MYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMA 55
            +Y V+GI++  GL + P + DHW +    N+ L R  M RD+F+L Y RFFH+A
Sbjct:  111 LYGVMGILITTGLTKKPRIIDHWGVEAHDNYPLFRACMPRDLFILFYGRFFHLA 164          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5JC56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC56_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.070e-7
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    2 MYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLT 61
            +Y V+GI++  G+ +   + DHW +    N+ LVR  M RD+F+L Y RFFH+A A + T
Sbjct:  101 LYGVMGILITAGITQNRRITDHWGMELHDNYPLVRACMPRDLFVLFYGRFFHLAPATTAT 160          
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Match: A0A6H5KUF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF1_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.370e-6
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   22 DHWDLSDFHNFKLVRQSMKRDMFLLIYSRFFHMASALSLTRRKDGS 67
            DH     FH++KLVR  + RD FLLIY RFFHMAS+ +  R +DG+
Sbjct:  639 DHLSCHSFHDYKLVRACLPRDTFLLIYGRFFHMASSGAPERLQDGT 684          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119246.1484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JFU5_9PHAE6.000e-1658.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3T1_9PHAE2.830e-1556.72DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JWP6_9PHAE1.820e-1139.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN93_9PHAE1.140e-1041.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT54_9PHAE3.500e-1041.18DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5KVH8_9PHAE4.940e-952.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHW0_9PHAE3.130e-838.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LD42_9PHAE4.280e-844.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC56_9PHAE1.070e-741.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUF1_9PHAE1.370e-654.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 2..50
e-value: 3.2E-5
score: 23.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119246contigH-elongata_contig119246:64..270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119246.1484.1mRNA_H-elongata_contig119246.1484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119246 34..270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119246.1484.1 ID=prot_H-elongata_contig119246.1484.1|Name=mRNA_H-elongata_contig119246.1484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
MMYTVLGIILALGLVRLPGMPDHWDLSDFHNFKLVRQSMKRDMFLLIYSR
FFHMASALSLTRRKDGSYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD