prot_H-elongata_contig11906.1473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11906.1473.1
Unique Nameprot_H-elongata_contig11906.1473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.960e-18
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW +  TRPDI  AL A  R++H PT R WK L++I +Y+NAT ++G+ +VR SGL L V+ DA YA     RR V+G+AV
Sbjct: 1034 MWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAV 1114          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.970e-18
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW +  TRPDI  AL A  R++H PT R WK L++I +Y+NAT ++G+ +VR SGL L V+ DA YA     RR V+G+AV
Sbjct: 1587 MWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAV 1667          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5KJD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.500e-16
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L+VF D+ YA ++ DRR  +G+AV
Sbjct:  148 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLYVFVDSSYADSTVDRRSTTGLAV 227          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 5.670e-16
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:    1 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGIAYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 80          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5JRV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.890e-16
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:   69 MWL-LFTRPDIALPLNKLQKIAHSPTERKWNALVRILSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 148          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5K887_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K887_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 9.230e-16
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:    1 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 80          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5KKB4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB4_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.570e-15
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:  162 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 241          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5JU54_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU54_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.690e-15
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:  160 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 239          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5L9N7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9N7_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.700e-15
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:   43 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 122          
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Match: A0A6H5KNB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB1_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 4.590e-15
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRFVRSSGLRLFVFSDADYAAASNDRRPVSGVAV 81
            MW+ + TRPDI   L    + +H+PT R W  L+RI +Y+N TK++G+ +VR SGL L VF D+ YA ++ DRR  +G+AV
Sbjct:  303 MWL-LFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAV 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11906.1473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKS3_9PHAE1.960e-1850.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE1.970e-1850.62Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJD2_9PHAE4.500e-1646.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR64_9PHAE5.670e-1646.91Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRV3_9PHAE7.890e-1646.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K887_9PHAE9.230e-1646.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKB4_9PHAE1.570e-1546.91Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JU54_9PHAE3.690e-1546.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L9N7_9PHAE3.700e-1546.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KNB1_9PHAE4.590e-1546.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..79
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11906contigH-elongata_contig11906:292..534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11906.1473.1mRNA_H-elongata_contig11906.1473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11906 292..558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11906.1473.1 ID=prot_H-elongata_contig11906.1473.1|Name=mRNA_H-elongata_contig11906.1473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MWMSVMTRPDIENALQACARHSHNPTARHWKGLLRIAAYVNATKEIGLRF
VRSSGLRLFVFSDADYAAASNDRRPVSGVAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like