prot_H-elongata_contig118929.1467.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig118929.1467.1
Unique Name	prot_H-elongata_contig118929.1467.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	134

Homology

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BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5JX67_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX67_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.160e-11
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGI-DPK---CWMRAAQDAPEWHRKVETGAEVFISAW 105
            S+ + L++  CE +IE +V KR L +AG VTRM D+RLP  ++   M GG   RG   +    R+ E   AF + D K    W  +A+D   W+ KVE GA  F+  W
Sbjct:   39 SHAQALIQAGCEETIEATVRKRRLCFAGFVTRMEDNRLPKRMLLGAMAGGVGYRGGQERDWVSRLGEGLVAFNMGDDKEGGKWKESAKDPEVWYNKVEDGAAWFMRKW 146

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BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5KSH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH7_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.770e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  151 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 258

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5KB07_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB07_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 4.250e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  181 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 288

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5L5T8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T8_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.150e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  271 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 378

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5LD24_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD24_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.350e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  360 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 467

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5JHY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY4_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.490e-11
Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAWSTNRVNEINARHAKEPFASLPFELLL 131
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG        R+ E   AF +  +     W  +A+D   W+ KVE GA  F+  W    V    +    + F +L  E+++
Sbjct:  322 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDGAAWFMRKWHRQEVGVTLSNTVGQVFCTLLNEIIV 455

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5JF72_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF72_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.520e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  450 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 557

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5KKB2_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.590e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  515 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 622

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5LM52_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LM52_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.780e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  780 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 887

[Close]

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.780e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    3 SYLEVLLRTDCE-SIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVGGKRKRGQPAKRLEHRVTEYCNAFGIDPKC----WMRAAQDAPEWHRKVETGAEVFISAW 105
            SY + L++  CE +IE +V KR L +AG V RM D+RLP  ++   M GG   RG       +R+ E   AFG+  +     W  +A+D   W+ K+E GA  F+  W
Sbjct:  793 SYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKW 900

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot

BLAST of mRNA_H-elongata_contig118929.1467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JX67_9PHAE	3.160e-11	38.89	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KSH7_9PHAE	3.770e-11	37.04	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KB07_9PHAE	4.250e-11	37.04	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5L5T8_9PHAE	5.150e-11	37.04	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LD24_9PHAE	5.350e-11	37.04	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JHY4_9PHAE	5.490e-11	32.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JF72_9PHAE	5.520e-11	37.04	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KKB2_9PHAE	5.590e-11	37.04	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LM52_9PHAE	5.780e-11	37.04	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K8Z5_9PHAE	5.780e-11	37.04	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47027:SF4		coord: 9..119
None	No IPR available	PANTHER	PTHR47027	FAMILY NOT NAMED	coord: 9..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig118929	contig	H-elongata_contig118929:193..594 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig118929.1467.1	mRNA_H-elongata_contig118929.1467.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig118929 193..594 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig118929.1467.1 ID=prot_H-elongata_contig118929.1467.1|Name=mRNA_H-elongata_contig118929.1467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MFSYLEVLLRTDCESIEVSVMKRILHYAGRVTRMHDDRLPNIVMRSEMVG
GKRKRGQPAKRLEHRVTEYCNAFGIDPKCWMRAAQDAPEWHRKVETGAEV
FISAWSTNRVNEINARHAKEPFASLPFELLLCRF