prot_H-elongata_contig118799.1453.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig118799.1453.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE) HSP 1 Score: 158 bits (400), Expect = 6.510e-41 Identity = 117/254 (46.06%), Postives = 141/254 (55.51%), Query Frame = 0
Query: 1 VESRKTYDPVVT-PVGSKESRAKATMPIPRPIAMGILPTPVADFEQARLAVWKKTVE-LLPDADCQKISS------------PPANGAVAPKVTSAVVAAMAPLGGPMALE---------QPTHLKKITCQD-EASEPSASELCPARVGTSNEEGGGA-----RWRGCYEGVPGPKRRMRVYCFRSPPGELDGWVPSSKEPRIRKATLRGGKRGASGKKEDEVK----------EATESKPEEEEGDDGSDDEV 215
VE+RKT+DPVV V +ESR KAT+P+PRPIAMGILPTP D EQARLA W+K + LPDA+ K + P + V V +A A A GG +A + T++ D E SASE P T+ ++ A R RGCYEGVPGPKRRMRVYCFRSPP EL+ WVPSS EPR R+AT KR ASGK E E + E + +P EE+G DG DDE
Sbjct: 193 VENRKTFDPVVPLEVEVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAERGKSAMQEKGFQGGVDVIPFDDVVVGQGVATAAEARAAAAGGAVAFRASVIASSGGRATNVGTEESTDREKCVSSASESAPPM--TTGDDSAAAWEDAKRPRGCYEGVPGPKRRMRVYCFRSPPRELNAWVPSSNEPRTRRATAGDYKRSASGKVEGEDESGGAKGVEDDETLKEEPAEEDGGDGGDDEA 444
BLAST of mRNA_H-elongata_contig118799.1453.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.080e-20 Identity = 79/206 (38.35%), Postives = 91/206 (44.17%), Query Frame = 0
Query: 1 VESRKTYDPVVTPVGSKESRAKATMPIPRPIAMGILPTPVADFEQARLAVWKKTVELLPDADCQKISSPPANGAVAPKVTSAVVAAMAPLGGPMALEQPTHLKKITCQDEASEPSASELCPARVGTSNEEGG-------------------------GARWRGCYEGVPGPKRRMRVYCFRSPPGELDGWVPSSKEPRIRKATLRG 181
VE R+ YDPV+ V KE+R KA MPIPRP+AMGILPTP +F+ A +A W AD NGA S T S PS VG +E G GAR RGCYE PGPKRRMRVYCFRSP GE +GWVP+ K R R++ L G
Sbjct: 871 VEKRRGYDPVL--VEGKEARMKAKMPIPRPVAMGILPTPGVEFDAAWMAAWMA-------AD--------GNGA------SNEXXXXXXXXXXXXXXXXXXXXXXTAATAGSPPST-----CAVGDGSEGGXXXXXXXXXXXXXXXXXXXAGFAVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDG 1048
BLAST of mRNA_H-elongata_contig118799.1453.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI) HSP 1 Score: 54.7 bits (130), Expect = 4.690e-5 Identity = 26/44 (59.09%), Postives = 28/44 (63.64%), Query Frame = 0
Query: 114 PSASELCPARVGTSNEEGGGARWRGCYEGVPGPKRRMRVYCFRS 157
P A + PA G GAR RGCYE PGPKRRMRVYCFR+
Sbjct: 700 PGAPGIGPAAAGAGFAVWEGARTRGCYEDDPGPKRRMRVYCFRT 743 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118799.1453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig118799.1453.1 ID=prot_H-elongata_contig118799.1453.1|Name=mRNA_H-elongata_contig118799.1453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bpback to top |