prot_H-elongata_contig118729.1449.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118729.1449.1
Unique Nameprot_H-elongata_contig118729.1449.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: D8LMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ8_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.080e-46
Identity = 80/98 (81.63%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    1 QSLLSLAFFGGFAGYLASQF--VFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKYH 96
            +SLLS+AF GGFAGYL SQF  VF+P F+LALGGGGFLAYLATTKNARGDL RLLGMR VAFL LVSEI+SDV LS K +VVGGICFSKAMFWD KYH
Sbjct:  112 KSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVSEINSDVALSAKGKVVGGICFSKAMFWDRKYH 209          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: A0A6H5K822_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K822_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.440e-44
Identity = 81/98 (82.65%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    1 QSLLSLAFFGGFAGYLASQF--VFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKYH 96
            +SLLS+AF GGFAGYL SQF  VF+P F+LALGGGGFLAYLAT KNARGDL RLLGMR VAFL LVSEIDSDV LS KA+VVGGICFSKAMFWD KYH
Sbjct:  330 KSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATMKNARGDLTRLLGMRTVAFLGLVSEIDSDVALSAKAKVVGGICFSKAMFWDRKYH 427          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: A0A4D9CPT7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPT7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.750e-13
Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 QSLLSLAFFGGFAGYLASQFV---FVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            Q+L  L F G F GYL + F+   F+PA+LLAL GGG   Y AT ++  GD+AR LGM++VA L LV  ++ ++ + RK   V  I +  A   D+++
Sbjct:  357 QTLAVLVFVGAFLGYLLAHFISLFFLPAWLLALAGGGLGGYTATLRDRGGDMARCLGMKLVAVLGLVRALEQELLVWRKLGKVFHISYGHAAALDARW 454          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: A0A7S2A8I8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8I8_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 9.730e-13
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    4 LSLAFFGGFAGYLASQFVFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            ++ A  GG  G   S    +P+++ A GG   LA+L+T ++ARGDLAR  GMRVVA L  + E+++++G++ KA  VGG  F + M  D K+
Sbjct:  186 IAAAAVGGICG---SDLPLIPSWMGAAGGAAALAFLSTLRSARGDLARTAGMRVVAILTELLEVNNELGVAGKAATVGGKIFDRVMILDRKH 274          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: K0R9T8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9T8_THAOC)

HSP 1 Score: 66.2 bits (160), Expect = 1.280e-10
Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    2 SLLSLAFFGGFAGYLASQFVFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            SLL++ F G F G        +PA++ ++ G    A +    NARGDL R +GMR+V   ++  EI+S++ + RK   VGG+ F K M  D K+
Sbjct:  406 SLLTMGFVGSFCG---GNVPIIPAWMGSIAGALMFAAMTMGSNARGDLGRSMGMRMVGLGKVALEINSELSILRKGATVGGLIFDKIMVMDRKH 496          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: B8BT22_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT22_THAPS)

HSP 1 Score: 66.2 bits (160), Expect = 1.290e-10
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    2 SLLSLAFFGGFAGYLASQFVFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            +LL++A  G F G        +PA++  + G    A L +  NARGDL R +GMRVV  L+LV  I+S++ +  KA  VGG+ F K M  D K+
Sbjct:  450 ALLAMAMVGSFCG---GNVPLLPAWMGGIVGAVVFASLTSGANARGDLGRTMGMRVVGLLQLVLTINSELRILGKAATVGGLIFDKIMIMDRKH 540          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: A0A7S0GJQ1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJQ1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.210e-8
Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    1 QSLLSLAFFGGFAGYLASQFVFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            Q L S+A               +P ++ ++ G    A++ T K+A+GDLAR +GM+VVAF++ +  I+S++ +  K  VV G  F K M  D K+
Sbjct:  103 QMLYSVAVMAFAGSICVGNMPLIPTWIGSMAGAAAFAFVTTLKSAKGDLARTMGMKVVAFVQEMVAINSELSVLSKTSVVCGKIFDKLMVLDRKH 197          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: B7FXM6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXM6_PHATC)

HSP 1 Score: 60.1 bits (144), Expect = 1.860e-8
Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    2 SLLSLAFFGGFAGYLASQFVFVPAFLLALGGGGFLAYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            S++++ F G   G        +PA++ AL G G  A+  T +NA+GDLAR +GMRVV+  + + +I+ ++ L  K  VV G    K +  D K+
Sbjct:  304 SVIAMGFVGSACG---GNLPLIPAWIGALAGAGSFAFWTTARNAQGDLARTIGMRVVSLAQEILQINYELELLSKFGVVSGKVLDKLLILDRKH 394          
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Match: A0A7S1B5X1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5X1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.220e-7
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0
Query:   37 AYLATTKNARGDLARLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKY 95
            A+L T K+ +GDLAR +GMRVVA  + + +I++++GL  K  +V GI F K M  D K+
Sbjct:  430 AFLVTVKSNKGDLARCMGMRVVAAFQELLDINAEIGLVEKLMIVVGIIFDKFMILDRKH 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118729.1449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LMQ8_ECTSI2.080e-4681.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K822_9PHAE2.440e-4482.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CPT7_9STRA8.750e-1341.84Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2A8I8_TRICV9.730e-1341.30Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K0R9T8_THAOC1.280e-1037.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8BT22_THAPS1.290e-1040.43Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0GJQ1_9STRA1.210e-833.68Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B7FXM6_PHATC1.860e-835.11Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1B5X1_9STRA1.220e-745.76Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..96
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118729contigH-elongata_contig118729:980..1907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118729.1449.1mRNA_H-elongata_contig118729.1449.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118729 980..1907 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118729.1449.1 ID=prot_H-elongata_contig118729.1449.1|Name=mRNA_H-elongata_contig118729.1449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
QSLLSLAFFGGFAGYLASQFVFVPAFLLALGGGGFLAYLATTKNARGDLA
RLLGMRVVAFLRLVSEIDSDVGLSRKARVVGGICFSKAMFWDSKYH
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