prot_H-elongata_contig11870.1446.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11870.1446.1
Unique Nameprot_H-elongata_contig11870.1446.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig11870.1446.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 3.350e-7
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    3 LDADQTVTEVRLIMKGTGSGASEFYLLDARFIAATADNPTDTYRVSISSTF 53
            LDADQ +TE+ ++++GTGSGA  F +LD R +    DNPTDT  V + STF
Sbjct:  775 LDADQFLTEINIVVQGTGSGAPGFAMLDIRVMGTAIDNPTDT--VYVGSTF 823          
BLAST of mRNA_H-elongata_contig11870.1446.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 7.680e-6
Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    6 DQTVTEVRLIMKGTGSGASEFYLLDARFIAATADNPTDTYRVSISSTFYW 55
            D  VTEV +IMKGTGSGA  F L +ARF+    DNP++T+ V  +    W
Sbjct:  769 DDPVTEVTIIMKGTGSGAPGFKLANARFLGTAIDNPSNTFYVGSTYVESW 818          
BLAST of mRNA_H-elongata_contig11870.1446.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 1.970e-5
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    5 ADQTVTEVRLIMKGTGSGASEFYLLDARFIAATADNPTDTYRVSISSTFYW 55
            A+Q VT + + MKGTGSGA  F +LDA  +    DNP+DT+ V  +   YW
Sbjct:  787 ANQYVTSIGIEMKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVGSTFIEYW 837          
BLAST of mRNA_H-elongata_contig11870.1446.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 3.600e-5
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    5 ADQTVTEVRLIMKGTGSGASEFYLLDARFIAATADNPTDTYRVSISSTFYW 55
            ADQ VT + + MKGTGSGA  F +LD   + A  DNP+DT+ V  +   +W
Sbjct:  108 ADQYVTSIGIEMKGTGSGAPGFAVLDPMVLGAKIDNPSDTFYVGSTFIEFW 158          
BLAST of mRNA_H-elongata_contig11870.1446.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 5.020e-5
Identity = 23/50 (46.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:    6 DQTVTEVRLIMKGTGSGASEFYLLDARFIAATADNPTDTYRVSISSTFYW 55
            D  VTE+ ++MKGTGS A  F L +ARF     DNP+DT+ V  +    W
Sbjct:  584 DDPVTEIAIVMKGTGSEAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEW 633          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11870.1446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KL74_9PHAE3.350e-752.94F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FTH1_ECTSI7.680e-650.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KFA6_9PHAE1.970e-547.06F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FUI8_ECTSI3.600e-547.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KH45_9PHAE5.020e-546.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11870contigH-elongata_contig11870:3260..4022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11870.1446.1mRNA_H-elongata_contig11870.1446.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11870 3217..4065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11870.1446.1 ID=prot_H-elongata_contig11870.1446.1|Name=mRNA_H-elongata_contig11870.1446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MDLDADQTVTEVRLIMKGTGSGASEFYLLDARFIAATADNPTDTYRVSIS
STFYWYRFPWASTT*
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